Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0055 |
Symbol | |
ID | 4036839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 63631 |
End bp | 64773 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637975427 |
Product | rod shape-determining protein RodA |
Protein accession | YP_582210 |
Protein GI | 94309000 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00692025 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGAC GCCGCGTCGT ATCGATCATC AAGTCTGCCC TGACCGGCTT CGACAAGCCG CTGGCCTTGA TCGTCTTTCT GCTGTTCGCC ACCGGCATCG TTGCGCTGTA CTCGGCCGCG ATCGACATGC CGGGCCGGGT CGAGGACCAG CTGCGCAATA TCCTGCTGTC GTACGTGGTG ATGCTGGTGA TCGCCTACAT GCCGACCCAG CTGTTGATGC GGATTGCCGT GCCGCTCTAC ACCGTGGGGG TAGCGCTGCT GATTGCCGTG GCGATGTTCG GCCTGATCCG CAAGGGCGCG CGGCGCTGGC TGAACGTGGG GATGGTGATT CAGCCCTCCG AGATCATGAA GATCGCGATG CCACTGATGC TGGCGTGGTA CTTCCAGAAA CGCGAGGGGG TGATCAAATG GTTCGACTTC GTCGTGGCAC TGATCATGCT CGGTATTCCG GTCGGCCTGA TCGCCAAGCA GCCTGACCTG GGCACTGCGT TGCTGGTGCT GGCCGCCGGC ATCTACGTGA TCTACTTCGC GGGCTTGACG TGGAAGATCA TCCTGCCGAT TCTCGGTGCG GGCGTGGTCG TGATCACGCT GATCGTGACT TACCAGAACC AGATCTGTGC GCCGGGCGTG AACTGGCCGA TCCTGCACGA CTACCAGCAG CACCGTGTCT GCACGCTGCT CGACCCGACC ACTGATCCGC TCGGCAAGGG CTTTCACACG ATCCAGTCGA TCATCGCGAT TGGCTCGGGC GGGGTGACCG GCAAGGGCTG GCTCAAGGGC ACACAGACGC ACCTCGAATT CATCCCCGAG AAGCACACCG ACTTCATCTT CGCCGTGTTC TCCGAGGAGT TCGGGCTGAT CGGTAATGCG GTGCTACTGG TCCTGTACCT GCTGCTGATC TTCCGCGGGC TCTATATTGC GGCGAACGCG CCAACGCTGT TCTCGCGTCT GCTGGCCGGC TCCATCACGC TGATCTTCTT CACCTACGCC TTCGTGAACA TGGGCATGGT GAGCGGGATC CTGCCGGTGG TGGGCGTGCC GCTGCCGCTG ATGAGCTACG GGGGAACCGC GCTGGTGACG CTGGGAATGG GCATCGGCAT TCTGATGAGC ATTTCCAGGC AGAAAAGGTT GATACAAACG TAG
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Protein sequence | MDRRRVVSII KSALTGFDKP LALIVFLLFA TGIVALYSAA IDMPGRVEDQ LRNILLSYVV MLVIAYMPTQ LLMRIAVPLY TVGVALLIAV AMFGLIRKGA RRWLNVGMVI QPSEIMKIAM PLMLAWYFQK REGVIKWFDF VVALIMLGIP VGLIAKQPDL GTALLVLAAG IYVIYFAGLT WKIILPILGA GVVVITLIVT YQNQICAPGV NWPILHDYQQ HRVCTLLDPT TDPLGKGFHT IQSIIAIGSG GVTGKGWLKG TQTHLEFIPE KHTDFIFAVF SEEFGLIGNA VLLVLYLLLI FRGLYIAANA PTLFSRLLAG SITLIFFTYA FVNMGMVSGI LPVVGVPLPL MSYGGTALVT LGMGIGILMS ISRQKRLIQT
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