Gene Rmet_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0039 
Symbol 
ID4036823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp41393 
End bp43624 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content66% 
IMG OID637975411 
Productpotassium-transporting ATPase subunit B 
Protein accessionYP_582194 
Protein GI94308984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2216] High-affinity K+ transport system, ATPase chain B 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC AATCCACCGC GACACGCTCC AGCGCTGCCG GCACGGCGTC GCGCAATCCG 
GCACCGGGTT CCACGGTGAT GACAGGCGGC GGCCTGCCAG GCCATCCGCG TCCCTCGCGC
GGCATGATGT CGCCCGAGCT GGTGAAGCCG GCCATCATCG ATGCCTTCCG CAAGCTGAAT
CCACGCGATC AGTTGCGCAA CCCGGTGATG TTCGTGGTCT ACGCCGGCAG CATCCTGACG
TCGATCCTGT GCGTGCGTGC CTGGCTGCAC CCGACGCCGG GTGGCGAATC GGCAGGCTTC
ATCCTGGCCG TGACGGTATG GCTCTGGTTC ACGGTACTGT TTGCGAACTT CGCCGAAGCA
CTGGCTGAAG GTCGCAGCAA GCAGCAGGCC GCTGCGCTGC GCGGACTCAA GACCACCACC
ATGGCACGCG TGGTGCGCGC CGGCCATCGC GATGCGCGCG CGCAGGGGGC TACCGAGCAG
CGTGCGGCCA CGGAACTGCG CAAGGGCGAT GTCGTGCTCG TCGAGGCCGG CGACATGATC
CCTGGCGATG GCGAAGTCAT CGAGGGCGTG GCGTCGGACG ATGAAAGCGC CATCACCGGC
GAATCGGCGC CGGTGATCCG TGAGTCGGGT GGCGACTTCT CATCGGTCAC TGGTGGCACG
CGTGTGCTGT CGGACTGGAT CATCGTGCGC ATCACGGCCA ACCCCGGCGA GAGCTTCATC
GACCGCATGA TCAGCATGGT CGAAGGTGCC AAGCGCCAGA AGACACCGAA CGAACTCGCG
CTGACGATCC TGCTGGTGGG GCTCACGCTG GTGCTGTTGC TGGCCACAGC CACGCTGCAG
CCGTATTCGC TCTACGCGGT GCTGGTGACC AAGGCCGGCG TGCCGGTCTC GGTGACGGTG
CTCGTGGCGC TGCTGGTCTG CCTGATTCCG ACCACGATCG GTGGCCTGCT GTCGGCGATC
GGCGTAGCCG GCATGAGCCG CATGATGGAA GCGAATGTGA TCGCCACGTC GGGCCGCGCG
GTGGAAGCGG CGGGCGATGT CGACGTGCTG CTGCTCGACA AGACCGGCAC GATCACACAT
GGCAATCGCC AGGCCTCGCG CTTTATCTGT GCGCCCGGCG TTACCGAGCG TCAGCTCGCC
GAGGCCGCGT GGCTGTCGTC GCTGGCCGAT GAAACACCGG AAGGCCGCAG CATCGTTGTG
CTGGCACGCC AGCAGTCAGA CGTGAGCGCG CCGGAGATGG GCGAGCGGGG ACTGGCAGCG
CCGGTGTTCG TGCCGTTCAC CGCGCAGACG CGCATGAGCG GTGTCGACGT GGCCAATGGC
CAGATCGTGC GCAGCGTGCG CAAGGGCGCG GCCGATGCGG TGCGCCGCTA CGTGACCGAG
CGCGCGGGCA AGTTCCCCGA TGTGGTGATG CAGGCCGTCG ATGATGTGGC GCGCGCGGGC
AGCACGCCGC TGGTGGTGGC GGAATCCATC GCGCAGGGTA CCGAGGAATC GGTGCGAGTG
CTCGGCGTGA TCGAGCTCAA GGACATCGTC AAGGCCGGCA TCCGCGAGCG CTTTGTCGAA
CTGCGCAAGA TGGGTATCCG CACGGTGATG ATCACCGGCG ACAACCGGTT GACCGCTGCG
TCGATCGCGG CCGAGGCCGG TGTCGACGAC TTCCTCGCCG AGGCCACGCC AGAGGCCAAG
CTGGCGCTGA TTCGCGAGTA CCAGAGCGAA GGGCGTCTTG TGGCGATGAC CGGCGACGGT
ACCAACGATG CACCGGCGCT GGCGCAGGCC GATGTGGCCG TGGCGATGAA CAGCGGCACG
CAGGCCGCGC GCGAGGCCGG CAATATGGTC GACCTGGACA GCAATCCAAC CAAGCTGATC
GAGATCGTAG AGATCGGCAA GCAGATGCTG ATGACGCGCG GGTCGTTGAC CACGTTCAGC
GTGGCCAACG ACGTGGCCAA GTATTTCGCC ATCATCCCGG CCGCGTTCGC GACCACCTAT
CCGCAGCTCA ACCTGCTCAA CGTGATGGGG CTGTCGACAC CGGGCTCGGC CATCATGTCC
GCCGTGATCT TCAATGCGCT CATCATCGTC GCGCTGATTC CGCTGGCGTT GCGCGGCGTG
GTGTACCGCC CGCTGGGCGC GGCGGTGCTG CTGCGCCGCA ACCTGCTGAT CTATGGCCTG
GGTGGCATCG TGGTGCCGTT CGTCGGGATC AAGCTGATCG ACATGTTGCT GACGATGTTC
GGCTGGGTCT GA
 
Protein sequence
MQQQSTATRS SAAGTASRNP APGSTVMTGG GLPGHPRPSR GMMSPELVKP AIIDAFRKLN 
PRDQLRNPVM FVVYAGSILT SILCVRAWLH PTPGGESAGF ILAVTVWLWF TVLFANFAEA
LAEGRSKQQA AALRGLKTTT MARVVRAGHR DARAQGATEQ RAATELRKGD VVLVEAGDMI
PGDGEVIEGV ASDDESAITG ESAPVIRESG GDFSSVTGGT RVLSDWIIVR ITANPGESFI
DRMISMVEGA KRQKTPNELA LTILLVGLTL VLLLATATLQ PYSLYAVLVT KAGVPVSVTV
LVALLVCLIP TTIGGLLSAI GVAGMSRMME ANVIATSGRA VEAAGDVDVL LLDKTGTITH
GNRQASRFIC APGVTERQLA EAAWLSSLAD ETPEGRSIVV LARQQSDVSA PEMGERGLAA
PVFVPFTAQT RMSGVDVANG QIVRSVRKGA ADAVRRYVTE RAGKFPDVVM QAVDDVARAG
STPLVVAESI AQGTEESVRV LGVIELKDIV KAGIRERFVE LRKMGIRTVM ITGDNRLTAA
SIAAEAGVDD FLAEATPEAK LALIREYQSE GRLVAMTGDG TNDAPALAQA DVAVAMNSGT
QAAREAGNMV DLDSNPTKLI EIVEIGKQML MTRGSLTTFS VANDVAKYFA IIPAAFATTY
PQLNLLNVMG LSTPGSAIMS AVIFNALIIV ALIPLALRGV VYRPLGAAVL LRRNLLIYGL
GGIVVPFVGI KLIDMLLTMF GWV