Gene Rmet_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0038 
Symbol 
ID4036822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp39542 
End bp41374 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content64% 
IMG OID637975410 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_582193 
Protein GI94308983 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAC CGCACTTCAC TCAATTTCTC GGACTGCTGG TTCTGTTTCT GGCCATCCTG 
TTCGTGGTGG GCCCATTCCT GGGCCGCTAT ATGCGCCGTG CCGTCGAGGA GGGCAACTTC
AGCCTGACCG CCTGGGGGCG GCCCATCGAG CGCGTGCTGT ATCGCGTGGC CGGTGTGCGT
GCCGATGCCG AAATGGGCTG GAAGCAATAC GCCATCGCGG TGCTTGTCTT CAATGTGATC
GGCGTGATCG CCGTCTACGC GCTCCAGCGC GTGCAGGGTT TGCTGCCACT GAATCCGCAG
GCGTTTGGCG CGGTCTCGCC CGATTCGTCG TTCAACACCG CCATCAGCTT TGTCACCAAT
ACGAACTGGC AAGGCTACAG CGGCGAGTCG ACGATGAGCT ACCTGACGCA GATGCTGGCG
CTGACGGTCC AGAACTTCGT CTCCGCAGCC ACTGGCATTG CCGTGGTCTT CGTTCTGATC
CGTGGCTTCG CGCGCCATAC CTCGGCCACG ATTGGCAACT TCTGGGTCGA TATCACGCGC
ACCACGCTCT ACGTGCTGCT GCCGCTGTCG GTGATCACAG CGCTGCTGCT GGTCAGCCAG
GGCGTGATCC AGAACTTCGA CGGCTACAAG GACGCGAATC TCGTCACGGC GGTCGAGTAC
ACGCAGCCCA AGGTCGACGC GGCGGGCCAG CCCGTGCTCG ACCCGCAAGG CAAGCCCGTG
ACAGAGGCGA TGAAGACGAC CACGCAGACG CTGGCGATGG GGCCCGTGGC TTCGCAGGAA
GCGATCAAGA TGCTCGGCAC TAATGGTGGC GGCTTCTTCA ACGCGAACTC GGCGCACCCC
TATGAGAACC CGACGCCGCT GTCCAATTTC ATCGAGATGC TGGCGATCTT CCTGATCCCG
GCGGCCCTGT GCTTCACGTT TGGCGAGATG GTGCGGGACC GGCGTCAGGG CGTGGCCGTG
CTGGCCTCGA TGACGGTGAT CTTCGTCGTG ATGGCCGTGG CGGCGATGGC GTCCGAGCAG
CACATCACGG CGGCCCTGTC GTCTCTGTCG ATCGACCATG CCGCGTCCGC ACTGCAGGCA
GGCGGCAACA TGGAAGGCAA GGAAGTGCGC TTCGGCATAT CGGCCACTTC GCTGTTCGCC
ACGATCACGA CCGCCGCTTC GTGCGGCGCG GTCAACGCCA TGCACGACTC GTTCACGGCC
ATTGGCGGTC TGGTGCCGAT GTTGCTGATG CAACTGGGTG AGGTCGTGTT TGGCGGCGTG
GGATCGGGCC TCTACGGAAT GCTCGTGTAC GCCGTGCTGG CCGTGTTTAT CGCGGGCCTG
ATGATTGGAC GCACGCCCGA GTACCTCGGC AAGAAGATCG AGGCCTACGA GATGAAGATG
ACCGCCGTGG CGATCCTGGT CACGCCGCTG CTCGTACTCG TGGGTACCGC CATCGCGGTG
ATGCTGGAGC CGGGTCGCGC CGGCGTGTTC AACCCGGGCA CGCACGGTTT CTCCGAGATC
CTGTATGCGC TGTCGTCGGC GTCGAACAAC AACGGCAGCG CGTTTGCCGG CCTTTCCGCC
AACACACCCT TCTACAACAC GCTTCTGGCT GCGGCTATGT GGTTCGGGCG CTTCTGGATC
ATCGTGCCGG TGCTGGCGAT GGCCGGTTCG CTGGCCGCCA AGCGCCGTAC GCCGGTCACG
GCCGGCACCA TGCCGACGCA TGGCCCGCTG TTCATCGTTT TGCTCGTGGG TTCGGTGCTG
CTGGTTGGCG CGCTGACCTA TGTGCCGGCG CTGGCCCTGG GGCCGGTGGC GGAGCAACTG
CAGCCCGCGG CGGTGACCGC GGCTGCCAAG TAA
 
Protein sequence
MSTPHFTQFL GLLVLFLAIL FVVGPFLGRY MRRAVEEGNF SLTAWGRPIE RVLYRVAGVR 
ADAEMGWKQY AIAVLVFNVI GVIAVYALQR VQGLLPLNPQ AFGAVSPDSS FNTAISFVTN
TNWQGYSGES TMSYLTQMLA LTVQNFVSAA TGIAVVFVLI RGFARHTSAT IGNFWVDITR
TTLYVLLPLS VITALLLVSQ GVIQNFDGYK DANLVTAVEY TQPKVDAAGQ PVLDPQGKPV
TEAMKTTTQT LAMGPVASQE AIKMLGTNGG GFFNANSAHP YENPTPLSNF IEMLAIFLIP
AALCFTFGEM VRDRRQGVAV LASMTVIFVV MAVAAMASEQ HITAALSSLS IDHAASALQA
GGNMEGKEVR FGISATSLFA TITTAASCGA VNAMHDSFTA IGGLVPMLLM QLGEVVFGGV
GSGLYGMLVY AVLAVFIAGL MIGRTPEYLG KKIEAYEMKM TAVAILVTPL LVLVGTAIAV
MLEPGRAGVF NPGTHGFSEI LYALSSASNN NGSAFAGLSA NTPFYNTLLA AAMWFGRFWI
IVPVLAMAGS LAAKRRTPVT AGTMPTHGPL FIVLLVGSVL LVGALTYVPA LALGPVAEQL
QPAAVTAAAK