Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0020 |
Symbol | |
ID | 4036804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 23692 |
End bp | 24558 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637975392 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_582175 |
Protein GI | 94308965 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAG TCCGCATTGG AGAACCCGGC GCCGAGCGCC CCGGCATGTT GGACAGCGAC GGCCGCGTGC GCGACCTGTC CGGCGTGATC GACAACATCG GCCCGCAGGA ACTGGCGCCT GGCGTGCTGG CCCGTCTGGC GAACATCGAC CCCGCCACGC TGCCGGTGGT GGAGGGCGGA CGCTTCGGCG TGCCCTGGAG CGGCGTTGGC AAGATCGTTG CCATCGGCCT GAACTATGCC GACCACGCCG CCGAAGCCGG CATGCCGCTA CCGACCGAGC CGATCGTGTT CCTGAAGGCC AACACGTCGC TGAACGGCCC GAACGACAAC GTGATGTTGC CGCTCGATTC GCAGAAATCG GACTGGGAAG TGGAACTGGG CGTGGTGATT GGCACCCGGG CTCGGAATGT GTGGAAGGAG CAGGCGCTCG ACTACGTGGC CGGCTACTGC GTGGTCAATG ATGTCTCCGA GCGCGAATTC CAGCTCGAGC GCGGCGGCAC GTGGGACAAG GGCAAGGGCT GCGACACCTT CTGTCCGGCG GGCCCGTGGC TGGTCACGCG TGACGAGGTA CCCGACGCGC AAAAGCTGGG GATGTGGCTC GACGTCAATG GCGAGCGCAT GCAGAAGGGC AGCACGGCCA CCATGGTTTT CGATGTGGCG ACGATCGTCA GCTATGTCAG CCGCTTCATG ACGCTGGAGC CCGGCGACCT GATCGCCACC GGCACGCCGC CGGGTGTGGG CATGGGCTTC AAGCCGCCGC GCTACCTGCG TGCCGGCGAC GTGATGCGCC TGGGCGTCGA GGGGCTTGGC GAGCAGTCCC AGAACGTCGT GGCCTACGTC GGGCGCGGTG GCGCAATACG AATCTAG
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Protein sequence | MKLVRIGEPG AERPGMLDSD GRVRDLSGVI DNIGPQELAP GVLARLANID PATLPVVEGG RFGVPWSGVG KIVAIGLNYA DHAAEAGMPL PTEPIVFLKA NTSLNGPNDN VMLPLDSQKS DWEVELGVVI GTRARNVWKE QALDYVAGYC VVNDVSEREF QLERGGTWDK GKGCDTFCPA GPWLVTRDEV PDAQKLGMWL DVNGERMQKG STATMVFDVA TIVSYVSRFM TLEPGDLIAT GTPPGVGMGF KPPRYLRAGD VMRLGVEGLG EQSQNVVAYV GRGGAIRI
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