Gene Rmet_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0020 
Symbol 
ID4036804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp23692 
End bp24558 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID637975392 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_582175 
Protein GI94308965 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG TCCGCATTGG AGAACCCGGC GCCGAGCGCC CCGGCATGTT GGACAGCGAC 
GGCCGCGTGC GCGACCTGTC CGGCGTGATC GACAACATCG GCCCGCAGGA ACTGGCGCCT
GGCGTGCTGG CCCGTCTGGC GAACATCGAC CCCGCCACGC TGCCGGTGGT GGAGGGCGGA
CGCTTCGGCG TGCCCTGGAG CGGCGTTGGC AAGATCGTTG CCATCGGCCT GAACTATGCC
GACCACGCCG CCGAAGCCGG CATGCCGCTA CCGACCGAGC CGATCGTGTT CCTGAAGGCC
AACACGTCGC TGAACGGCCC GAACGACAAC GTGATGTTGC CGCTCGATTC GCAGAAATCG
GACTGGGAAG TGGAACTGGG CGTGGTGATT GGCACCCGGG CTCGGAATGT GTGGAAGGAG
CAGGCGCTCG ACTACGTGGC CGGCTACTGC GTGGTCAATG ATGTCTCCGA GCGCGAATTC
CAGCTCGAGC GCGGCGGCAC GTGGGACAAG GGCAAGGGCT GCGACACCTT CTGTCCGGCG
GGCCCGTGGC TGGTCACGCG TGACGAGGTA CCCGACGCGC AAAAGCTGGG GATGTGGCTC
GACGTCAATG GCGAGCGCAT GCAGAAGGGC AGCACGGCCA CCATGGTTTT CGATGTGGCG
ACGATCGTCA GCTATGTCAG CCGCTTCATG ACGCTGGAGC CCGGCGACCT GATCGCCACC
GGCACGCCGC CGGGTGTGGG CATGGGCTTC AAGCCGCCGC GCTACCTGCG TGCCGGCGAC
GTGATGCGCC TGGGCGTCGA GGGGCTTGGC GAGCAGTCCC AGAACGTCGT GGCCTACGTC
GGGCGCGGTG GCGCAATACG AATCTAG
 
Protein sequence
MKLVRIGEPG AERPGMLDSD GRVRDLSGVI DNIGPQELAP GVLARLANID PATLPVVEGG 
RFGVPWSGVG KIVAIGLNYA DHAAEAGMPL PTEPIVFLKA NTSLNGPNDN VMLPLDSQKS
DWEVELGVVI GTRARNVWKE QALDYVAGYC VVNDVSEREF QLERGGTWDK GKGCDTFCPA
GPWLVTRDEV PDAQKLGMWL DVNGERMQKG STATMVFDVA TIVSYVSRFM TLEPGDLIAT
GTPPGVGMGF KPPRYLRAGD VMRLGVEGLG EQSQNVVAYV GRGGAIRI