| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0011 |
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| Symbol | |
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| ID | 4036795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 15026 |
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| End bp | 16420 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637975383 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_582166 |
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| Protein GI | 94308956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA CCACGCCCGT TGCCGGGCTC CGTACCCGGC CCAGCGGTGG CAATGCTTCC
GTCACCAGTT TGCAGCGTCG CCACGTCATG CAAGCCGCGG CCGCCGCTGC ACTGGCCACG
GGCCTGGCAC CGCTGGCGCG CCCCGGTGCC GCGCACGCGG CGGCCAGGCA TACGCTCAGG
ATTCTTCAGT GGAACCATTT CGTGCCGGGC TACGACAAGT GGTTCGACAA CACGTATGTG
AAGGAATGGG GGCAGCGCCA CGATACGGAA GTCATCGTCG ATCACGTCGG CATTCCGGCG
CTGGCTACGC GTGCCGCTGC CGAGGTGTCG GCCCAGAAGG GGCACGATCT CTTCATGTTC
CTGTCGCCGC CGCCGGTGTA CGAGGACCAG GTCATCGATC ATCGCGACAT CTACGAGGAA
TGCCAGCGCA AGCATGGCAA GCCCGTGGAC CTGGCGGTTC GCAGTACCTA CAACCCGAAG
ACCCGCAAGT ACTTCGCCTT CTCCGACAGC TTCGTACCGG ACCCGGTCAA TTACCGCAAG
GACCTGTGGG ATGCCATCGG CGCGAAGCCT CCCGATAGCT GGGACGACGT GCTGACCGCC
GGGCGCAAGA TCAAGCAGGC GAAGGGCGTG CCGGTGGGTA TCGGCCTCTC CGCGGAACTC
GATACCGCCA TGGCCATGCG CACGATCCTC TATGCATTCG GTGGCGCCGT GCAGGACATG
CGCGGCAATG TCGTGCTGAA CTCGCCCGGC ACGCTCGAGG CCGTCAAGTA CGTGCGAGCG
CTGTATCGCG ACACCATGAC ACCCGAAGTG CTGGCCTGGG ACCCATCCTC GAACAACCGG
GCCATGCTGG CCGGCAAGAT CTCGCTCTGC CTGAACGCCA TCTCGATCAC GCGCGAAGGC
GAAAACAAGC AGATCCCGGT CACGCCCGAC ATCTGGCTGA CGCAGGCACT GCGCGGCCCC
GCGCAACGCA TCTGCCTGGA ACACGTGATG GACTGCTACG TGATCTGGAA ATTCGCCGAG
AACATTGCCG GCGCGAAGCA GTTCCTCGTC GACTACATCG ACAACTTTCG CGATGGCTTC
GTTGGCAGCG AGTTCTACAA CTTCCCCTGC TTCCCGAGCA CCGTGCCCGA CCTCAAGACG
ATGATCGAAG CGGACGCCAA GGCCACGCCG CATGACAAGT ACAAGGTGCT GGGCGTGCTG
ATGGAGCAGG CCACCAACGT GGGCTACCCC GGATACGCCA ACGCCGCTAT CGACGAGATC
TTCAACACGT GGGTCCTCAA CACGATGTTC GCCCGCGCCG CAACCGGCGA CGCGTCTCCG
GAGGACGCCA TCCGCGATGC CGAGAACGCT TGCAAGCGGA TCTTCGCAAA ATGGAAGGCG
AGGGGGCTGG TATAG
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| Protein sequence | MKNTTPVAGL RTRPSGGNAS VTSLQRRHVM QAAAAAALAT GLAPLARPGA AHAAARHTLR
ILQWNHFVPG YDKWFDNTYV KEWGQRHDTE VIVDHVGIPA LATRAAAEVS AQKGHDLFMF
LSPPPVYEDQ VIDHRDIYEE CQRKHGKPVD LAVRSTYNPK TRKYFAFSDS FVPDPVNYRK
DLWDAIGAKP PDSWDDVLTA GRKIKQAKGV PVGIGLSAEL DTAMAMRTIL YAFGGAVQDM
RGNVVLNSPG TLEAVKYVRA LYRDTMTPEV LAWDPSSNNR AMLAGKISLC LNAISITREG
ENKQIPVTPD IWLTQALRGP AQRICLEHVM DCYVIWKFAE NIAGAKQFLV DYIDNFRDGF
VGSEFYNFPC FPSTVPDLKT MIEADAKATP HDKYKVLGVL MEQATNVGYP GYANAAIDEI
FNTWVLNTMF ARAATGDASP EDAIRDAENA CKRIFAKWKA RGLV
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