Gene Rmet_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0010 
Symbol 
ID4036794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp13969 
End bp15006 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID637975382 
ProductABC transporter-related protein 
Protein accessionYP_582165 
Protein GI94308955 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAG TGGAAACACG CTCGCTGACC AAGCGTTACG ACAGCACCAC CGCCGTCGAC 
GCGATCGACC TCGCCGTGCG CGAGCACGAG TTCCTGGTGC TGCTGGGCCC ATCCGGCTCG
GGCAAGACGA CGCTGCTGCG CATGATCGCG GGACTCGAGA CGCCGACCTC CGGCGATGTG
CTGGTGAGCG GGCGCATCGT CACGGGGCTC CCGCCGCGCG CGCACAACAT GGCGATGGTC
TTCCAGAGTT ACGCGCTATA TCCGCACCTG ACCGTGGCGG GCAATATCGC CTTTCCGCTG
CAGGCCCAGC ATATGGCACG CGACAAGATC GACAGCAAGG TCGAGTGGGC CGCCTCGCTG
TTCGGCATCG GCCATCTTCT CGCGCGGAAA CCACGTCAGC TCTCGGGCGG CGAACGTCAA
CGCGTGGCGC TTGCGCGTGC TGTCGTGCGC GACCCCGTTG CATTCCTGCT CGATGAACCG
CTATCGAATC TCGACGCCAA GCTCCGTGCT TCGGCGCGAG AGGAACTGCA GCAACTCCAA
CGCCGCCTCG GCACCACCAC GATCTACGTG ACCCACGATC AGGTGGAGGC ACTGGCGCTG
GGGGATCGCG TGGCCGTGCT CGATCATGGC GGCATACGTC AACTCGACAC GCCGCAGCGC
GTGTATGCGC ATCCTGTCGA TCGGTTCGTC GCCACGTTCA TCGGGTCACC TCCCATGAAT
CTCGTTGCCA GCGACGGCAT GGAGATCGGC TTCCGACCCG AGCATTTTTT ACCGGATGAC
GTCTTCACCG CCGATGCATC GTTGGAACGG TTTCCGTTGG ACATCACTCG CATCGAAAAC
CTGGGCGCGG ACCGGCTCGT GTACGGCGTG CTGGCACCAC CGCAGCCGCC CGTGAAAGTC
ATCTCCCGGA TACCGTGCAC GGTGAACGTG TCACCGCAAC CTGGCACGCG TCACATGTTC
GCCGTGCGCC GTGCTGATCT GCACCACTTC GACACGAGCA GTGGCACAAG CCTGAGCGTG
GCGGAAGGCG TGACATGA
 
Protein sequence
MATVETRSLT KRYDSTTAVD AIDLAVREHE FLVLLGPSGS GKTTLLRMIA GLETPTSGDV 
LVSGRIVTGL PPRAHNMAMV FQSYALYPHL TVAGNIAFPL QAQHMARDKI DSKVEWAASL
FGIGHLLARK PRQLSGGERQ RVALARAVVR DPVAFLLDEP LSNLDAKLRA SAREELQQLQ
RRLGTTTIYV THDQVEALAL GDRVAVLDHG GIRQLDTPQR VYAHPVDRFV ATFIGSPPMN
LVASDGMEIG FRPEHFLPDD VFTADASLER FPLDITRIEN LGADRLVYGV LAPPQPPVKV
ISRIPCTVNV SPQPGTRHMF AVRRADLHHF DTSSGTSLSV AEGVT