Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0002 |
Symbol | |
ID | 4036786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 2220 |
End bp | 3335 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637975374 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_582157 |
Protein GI | 94308947 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.453135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG TCAAAACCTC GCGAGACAAT CTGCTGCGTC CGCTGCAAAT CGTGAGCGGC ATCGTGGAGC GCCGCCACAC CCTCCCGATC CTGGCCAACC TGCTGATTCG CAAGTCCGGC TCGAACGTAT CCTTCCTCTC GACCGACATC GAGATCCAGA TCACGACCCA TGCCGAATGC GGTGTCGGTA GCGACAGCGT GGCGACCACC GTGGCCGCGC GCAAGCTGCT GGACATCCTG CGCGCGATGC CTGACGGCGA CGTGGCGCTG TCGCTGAACG ACAAGCGCAT GACCGTGCAG TCGGGCAAGA GCAGGTTTGC GCTGCAGACG CTGGCCGCGG AAGAATTCCC GACCGTTGCC GAAGCCGCCG AATTCAACGC CAGCGTGAGC CTGCCGCAGA AGACGTTCAA GCATCTGCTG GCGATGGTCC ACTTCGCCAT GGCGCAGCAG GACATCCGTT ACTACCTGAA CGGGATGCTG CTGGTGGTCG ATGGCAAGAA GGTCATGGCC GTGGCGACCG ACGGTCACCG CCTGGCGTAC TGCGGCGTGG AGCTCGAGAA TGAAGCGACC GGCGTCGGTT CGCGCCAGGA AGTGATCATC CCGCGCAAGA CCATCCTGGA ACTGCAACGC CTGCTGGAAG ACACCGATGA TCCCGTGCAG GTGCAACTGG CCGCCAATCA GGTCAAGTTC ACCTTCGCCA ATATCGAACT GATCAGCAAG CTGGTGGAAG GCAAGTTCCC GGACTTCCAG CGCGTGATCC CGAAGGGCTA CAAGAACGCG TTTGCGATCG ACCGCGTGCA ACTGCAACAG GCGCTGCAAC GCACGGCGAT TCTGACTACC GACAAGTTCA AGGGCGTGCG TTGCATTCTC GATACGCACG TGCTGAAGAT CAGCTCCACC AACGCCGATC AGGAAGAGGC GCAGGAAGAG CTGGAACTCG ATTATTCGGG CGATGCGCTC GATATCGGCT TTAACGTGAC CTATCTGCTC GATGTGCTCG CCAACCTGAA GAGCGAGCAG GTGCAGGTCA GCCTCGGCGA CTCCAATTCG AGCGCGCTGA TTACGGTGCC GGAAGACGAC AACTTCAAGT ATGTCGTCAT GCCGATGCGC ATTTGA
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Protein sequence | MQLVKTSRDN LLRPLQIVSG IVERRHTLPI LANLLIRKSG SNVSFLSTDI EIQITTHAEC GVGSDSVATT VAARKLLDIL RAMPDGDVAL SLNDKRMTVQ SGKSRFALQT LAAEEFPTVA EAAEFNASVS LPQKTFKHLL AMVHFAMAQQ DIRYYLNGML LVVDGKKVMA VATDGHRLAY CGVELENEAT GVGSRQEVII PRKTILELQR LLEDTDDPVQ VQLAANQVKF TFANIELISK LVEGKFPDFQ RVIPKGYKNA FAIDRVQLQQ ALQRTAILTT DKFKGVRCIL DTHVLKISST NADQEEAQEE LELDYSGDAL DIGFNVTYLL DVLANLKSEQ VQVSLGDSNS SALITVPEDD NFKYVVMPMR I
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