Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0001 |
Symbol | dnaA |
ID | 4036785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 104 |
End bp | 1843 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637975373 |
Product | chromosomal replication initiation protein |
Protein accession | YP_582156 |
Protein GI | 94308946 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGATT TCTGGCAGGC AGCAGCCGCG CAACTCGAGC GCGAACTGAC GCCGCAACAG TTCAAGACCT GGATCAAGCC GTTGGCGCCC GTGGCCTTCG ACGAGGAAGC GCATGCGCTG CGGATTGCCG CGCCCAATCG CTTCAAGCTT GACTGGGTCA AGAGCCAATT TTCGGGTCGG ATCACGGCCC TTGCGTGCGA GTACTGGGAA ACGCAGGTTA GCGTTCACTT CGTGCTCGAC CCCGCTGCAT CGGGGCGCGC GGCCGCATAT ACCCAGCAAG CAATGCAACA GGGCCAGGAT GCGCCCGCTG CAATGGGTAC GGCCATGGGC GCAGGCCATG CGCCTTATCC GGGCATGGCT GGCATGGCCG GAGGCCAATC CTACGGGCCG GCTGGCGCGC AGGTTCCCGG CGCGCATCCG AACCAGATGG CTGGATATCC CGACTATCCC AGCCAGTCCA ATGGCGCGCC CGCTGGCTAT GGCGGCGCGG CGGGTGGACA AACGCCCTAT TCCCAGTCGC AGCAGTCCGC GCAGGGACGC GGCGCGGCAC CCACCGGGCA TCCGCTTCAG GGCAATTCGG CCGCGCATTT GCCGGACATG GGCGAGATCG ACGTGGCCCA GATGGACCCG GCCGAAGCCA GCGCCCGCTC CTATCGCGTG CCGTCGCCGC AGCCGGCAGC GCCGGCCGGG GCGCAGCAGC AGAGCGACAC GGTGCACGAG CGCTCGCGCC TGAACCCGAT CCTGACGTTC GACAACTTCG TCACCGGCAA GGCCAACCAG CTCGCGCGTG CCGCGGCGAT CCAGGTGGCC AACAACCCGG GCAAGTCGTA CAACCCGCTC TACCTGTACG GCGGCGTTGG CCTCGGCAAG ACTCACCTGA TTCACGCGAT TGGCAACTTC ATGCTGATGG AGAACCCGCG CGCGCGCATC CGGTACATCC ATGCGGAGCA GTACGTTTCC GACGTGGTGA AGGCCTACCA GCGCAAGGCG TTCGACGAGT TCAAGCGCTA TTACCACTCG CTGGACCTGC TGCTGATCGA TGATATTCAG TTCTTCTCCG GCAAGAACCG CACGCAGGAA GAATTCTTCT ACGCATTCGA GGCGCTGATC GCCAATCGCG CCCAGGTGAT CATCACCAGT GATACCTATC CGAAGGAGAT CACCGGCATC GACGACCGGC TGATTTCGCG TTTCGACTCC GGCCTGACTG TGGCGATCGA GCCGCCCGAG CTGGAGATGC GCGTCGCCAT TCTGATGAAG AAGGCCGCCG CCGAGAACGT GAGCGTGCCC GAGGAAGTGG CCTTCTTCGT GGCCAAGCAC CTGCGGTCGA ACGTGCGCGA GCTGGAAGGC GCGCTGCGCA AGATCCTGGC GTTCTCGAAC TTCCATGGCA AGGACATCAC GATCGATGTC ACGCGTGAAG CGCTGAAGGA CCTGCTGACC GTGCAGAATC GCCAGATCTC CGTGGAGAAC ATCCAGAAGA CCTGCGCAGA TTTCTACAAC ATCAAGGTCG CGGACATGTA TTCCAAGAAG CGGCCCGCCA ATATCGCGCG GCCGCGCCAG ATCGCGATGT ATCTGGCGAA GGAACTGACG CAGAAGAGTC TGCCGGAGAT CGGCGAGTTG TTCGGCGGGC GCGATCACAC CACGGTGCTT CACGCCGTGC GCAAGATTGC CGAAGAGCGT AGCAAGGACG CGCAGCTCAA TCACGAGTTG CACGTGCTGG AACAGACGCT CAAGGGCTGA
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Protein sequence | MQDFWQAAAA QLERELTPQQ FKTWIKPLAP VAFDEEAHAL RIAAPNRFKL DWVKSQFSGR ITALACEYWE TQVSVHFVLD PAASGRAAAY TQQAMQQGQD APAAMGTAMG AGHAPYPGMA GMAGGQSYGP AGAQVPGAHP NQMAGYPDYP SQSNGAPAGY GGAAGGQTPY SQSQQSAQGR GAAPTGHPLQ GNSAAHLPDM GEIDVAQMDP AEASARSYRV PSPQPAAPAG AQQQSDTVHE RSRLNPILTF DNFVTGKANQ LARAAAIQVA NNPGKSYNPL YLYGGVGLGK THLIHAIGNF MLMENPRARI RYIHAEQYVS DVVKAYQRKA FDEFKRYYHS LDLLLIDDIQ FFSGKNRTQE EFFYAFEALI ANRAQVIITS DTYPKEITGI DDRLISRFDS GLTVAIEPPE LEMRVAILMK KAAAENVSVP EEVAFFVAKH LRSNVRELEG ALRKILAFSN FHGKDITIDV TREALKDLLT VQNRQISVEN IQKTCADFYN IKVADMYSKK RPANIARPRQ IAMYLAKELT QKSLPEIGEL FGGRDHTTVL HAVRKIAEER SKDAQLNHEL HVLEQTLKG
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