| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6326 |
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| Symbol | |
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| ID | 4036764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 12531 |
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| End bp | 16334 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637975352 |
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| Product | hypothetical protein |
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| Protein accession | YP_003518252 |
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| Protein GI | 291434871 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0236689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAAAT TGGCGATCTC CTTTGTCAGA CCCCGCTTCG TTCCCATGCG CTTTACTCCT
ACTGGCCCCT CAATACCCGA TGAACTGCTA ACCGCCCGCG ATGCCGGTGA CGTTCTGTTT
TTTTGCGGAG CGGGTGTTTC GAAGGCGAGC GCTGGGCTCC CGGATTTTTA CCGTCTCGCC
GAAATGGTGA TGGACGAACT CGGCGCAATT CAAACTAGCC CACCTCGGCA AGTATTTGCA
GCTACAAGAA AGCTCCAGGA AGAAATTCAG AATCCTGGCA TTGGAGGCTT GGTTGCAGCT
GACCGACTTT TCTCGCTGCT TGAACGAGAC TTCGACGCGA TCGACGTGCG AGCCGCTGTC
GCTAAGTCCC TGAAACCGGT AGTCGATTCA TCATCTGCGC TCACACCCCA CCGTACTCTC
CTAGACCTCT CAAGAGGGCC CACTGGAGAG CCGCGCCTGG TCACAACGAA CTTTGACCTG
CTATTTGAGC AATGCGATGC GACTCTCCCT CAGTTCAGCC CTCCCCATCT TCCAGACCCA
CGCCGCGAGC AAGACTTCCG CGGCATCGTC CATCTACATG GTCGGGTCAA CGACTCTTAC
ACAGCAGCGC ATGACAACGA ACTTGTCATG TCGAGCGCCG ATTTTGGGTA TGCCTATCTG
TCGGAGGGAT GGGCGACACG CTACATCAAT CTTCTGCTGC AGAGATATCA GATCGTGTTT
GTCGGCTATT CAGCAGATGA CCCACCGATC CAGTACCTGC TCGAAGCGCT AAGCCGCTTC
TCCACGCCAG GGAACGCCAT GTATGCATTC CAGTCTGGTG ACACGGCGCA GGCCGGTGCA
TTGTGGGCGC ACAAGGGTGT TACTCCGATT GCCTACAGTA GCGACCACCA ACATGCCGCA
CTATGGGAAT CCCTAGAGCA ATGGGCCATT CGCGCACGGG ATGTGGATGC CTGGAACGAC
GATGTCTTGT GCAAGGCCAT GTCTGGCCCT GTTGCCCTCG AACCTCATGA GCGCGGCATA
GTCGCGCATC TCGCCTCGAC ACTGGACGGT GCCAGCAGGA TCGCTGCTGC GCAAGTTCCG
ATCCCCGCAG AGTGGTTGTT TGTTTTTGAT CGCAACGCCA GGTACTTCGG GCCACCCCAA
GAACCCCGAA TCTTGCTAAG CAATGATATT CCGCCATTCT TCGATACCGT CTGCCTCGAC
TCCGACGAGC CACCAATTCG GGACGAAGAC TTGACCCTGA ATGCTTCGAG CATGCCCGCT
GAGGCGTGGG ACGCGTTCGA GATCAACCGC GGGGATATCG CAGTCGTTGG ACCAGAGTCT
GTGGCTGGCT GGCGTGATTG CCAACATCCA GACTTGCCGC ACCGGCTCAG ATCCCTGCAG
CAATGGTTGC TTAGAGTGTC GCACCAACCA AGCGCCTTGA TCTGGGCCGC CGGCATCAGC
GCCCTGCATC CGGGCATTAT TTCGCGGCTA CAGTACAGAC TCCGTTTCGA CTCGGCCAAG
TATTCTCCTA AGCTTCGGAG TGATTGGCAG TTCGTCCTTT CTTCCCTTAG TCAGCACCGG
TCCGATCCGG ACCACCAAAA GTACTCCGTC GAAGGCAAAG CCAGCGTCAG CGGCTGGACA
GCAAGCTTGG TACAGGAAGC GATGCGGCTG TATCGGCCAC AGCTACGCGT GGAGCCGTCA
CACGGGGTGT CCGCATTTTG TGGAGCAGCC GAGCAAGATC TGATACATGT CAGCCTCGAT
TATGTCAGGC CTCACAGCGA GATTGATATT CCACCTCATC AGAGGAAATA CGCTCTGTCG
CTACTCAGAC AAGAGATTGA ACACGCTATA CGCCTGGAGC GGGAGATCAA TCCCGATTTC
TACAGCTACC TACATACTCT CGTCCGCAAT GACGGGGCAC CAGGAGACCG CGATTCGCAT
GGAATCACTG GACACGTGGT TGCCTACATT GGACTGCTAT TTGCGCTCGC CGATGTCGAT
GCAGCAGGCG CACGTCTCGA GGTATCGCAC TGGGGGGACT CTGACGACAT TTCCACTCGA
ATCAGGATTG TGGCCGCTTC AAGATCCGAT CTTGCGTCGC CGGCGGAAGC CGCGAATGCT
TACTTGAACT TGACGGACGT TGATTTCTGG GATGACGCGC ACGAACGAGA TCTGCTTATC
AGCATCAGAG CTCGATGGCC CGAACTCCCG CCAAACGCCC AAGAGCAATT GACCAATCGC
ATACTCAACG GCGAAATTCC ATACGATGGT GTGGCCAACG ACACGAAGGT GAGATGCCGA
CTTGGTCGCG TTCAATGGCT AAAGAAGCAT GGCATAGATA TCGAAGCAAG CCATTCGGAC
AAGATCGACG AACTTCGCAA TCTGGTTCCG GATTGGACTG AAGATGCAGC ATTTTTTACA
GGACGTCCGA AATTCGAGGT CTTTTCTGTT GACCAAGATA CAGCGTTGGC TCCACTTGCG
GGAGTTATGC TGGTAGACAT CGTTGCCAAG GTGGAAGAGA TTCGCAATCA ACAGCCTCGC
CATCTACATA CCGTAAGCGA GCCCTTCCTT GGGCTTGTAA ATCACAGTCC ATCGAAGGCA
CTTAAAGCGC TGGTACTGGC CCAAAGAAAG GGAATCTATC ACCCTTGGAC GTGGGCGACA
CTGTTGAACA AGGAACATGC ATCTCCGCGA TTGGTGTACG CGCTCGCAGC GCGACTTTCG
CGCCTCTCGC CACACCAACT CAGACAAGTG GTACGCGAAG CGGCCAATTG GTTGCGGCGC
AATACCCAGC GTCTTGATTC CATTAGTCAC CAGATGTTTT GGGATCTGTG GCAAGCCTGC
GCTGAAAGCC TCCGCTGCGA GCCATTCGAT GACCCCGCTG GCAAACGTAA CAGGAGTTGG
ATTGAGCAGA GTGTGGACAG TGCGGCCGCC CGGCTCGCCG AGTCGGCTTT TTTGGTCGAC
AGCGACTTGG ATACTCCTGT GATTCTTTCC GAATTGACGA CCCGCATTGT GCAACTCTTG
CAGCTGCCGG CCCCTTTTCG GCAGCACGCA ATATTCCGCA TCGCGATGCG TTTCGAGGTC
TTCTTCGCGA AGGATAGTCA ATGGACCACA GAGACGTTGC TACCGCTATC TTCATCTCAA
GGCAACGATT CGGCAGCATT TTGGCAGGGC TACCTTTACC GCACTACTAC CCTTTCTCCC
AAGGCATTCG CCTTGTTCAA GGATGTCTTA ATCAGTCACG TGCGAGATAG AACTTTATTG
AAAGGTGGCA GTGCGCTAAT TGCAGCAACA CTTCTTGATC GTTGGATGCA AAGAACCGAG
GCTGCTTGCG CCGAGGAAGC AATGTCTGAC TCAGAGCTAC GCGAGATCTT GGTGCTCTCG
GATGAAGAGT TCCGCGACGA GCTAGTTCGG ACACTTGCAA GATGGACGAA GGAGTCTCCC
GCCAAGTATG ACGACCAAGT CCTCTACTTT CTGGAGAAAG TATGGCCGCT GCAGAAGGTC
GTGAAAAATG CTCGTATGAC TGCCCGGCTT GTGGATCTTG CTTTCGCGGT TTCCGACAGG
TTCAGTGAGG CGGTCAAACT CATCGTTCCA AAAGTGGTAA TCGCACCGCG GGAACTATCG
ATGCGATATT ACAAGGTCGA CGAACGGGTC GTTCAGAGCC ACGGCCCGGC ATTAGTCGAC
CTCCTTTGGC AAACACTACC GACAGCGGCG TCGATGTGGC CGGACGATGT CGACAACCTA
CTGACAGAAC TCCAGAGACT ACCGACATTA AATGGATCGG CTAAGCTCTC GACACTACTT
CGTCGGTCAA AGTATCGCAG GTGA
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| Protein sequence | MPKLAISFVR PRFVPMRFTP TGPSIPDELL TARDAGDVLF FCGAGVSKAS AGLPDFYRLA
EMVMDELGAI QTSPPRQVFA ATRKLQEEIQ NPGIGGLVAA DRLFSLLERD FDAIDVRAAV
AKSLKPVVDS SSALTPHRTL LDLSRGPTGE PRLVTTNFDL LFEQCDATLP QFSPPHLPDP
RREQDFRGIV HLHGRVNDSY TAAHDNELVM SSADFGYAYL SEGWATRYIN LLLQRYQIVF
VGYSADDPPI QYLLEALSRF STPGNAMYAF QSGDTAQAGA LWAHKGVTPI AYSSDHQHAA
LWESLEQWAI RARDVDAWND DVLCKAMSGP VALEPHERGI VAHLASTLDG ASRIAAAQVP
IPAEWLFVFD RNARYFGPPQ EPRILLSNDI PPFFDTVCLD SDEPPIRDED LTLNASSMPA
EAWDAFEINR GDIAVVGPES VAGWRDCQHP DLPHRLRSLQ QWLLRVSHQP SALIWAAGIS
ALHPGIISRL QYRLRFDSAK YSPKLRSDWQ FVLSSLSQHR SDPDHQKYSV EGKASVSGWT
ASLVQEAMRL YRPQLRVEPS HGVSAFCGAA EQDLIHVSLD YVRPHSEIDI PPHQRKYALS
LLRQEIEHAI RLEREINPDF YSYLHTLVRN DGAPGDRDSH GITGHVVAYI GLLFALADVD
AAGARLEVSH WGDSDDISTR IRIVAASRSD LASPAEAANA YLNLTDVDFW DDAHERDLLI
SIRARWPELP PNAQEQLTNR ILNGEIPYDG VANDTKVRCR LGRVQWLKKH GIDIEASHSD
KIDELRNLVP DWTEDAAFFT GRPKFEVFSV DQDTALAPLA GVMLVDIVAK VEEIRNQQPR
HLHTVSEPFL GLVNHSPSKA LKALVLAQRK GIYHPWTWAT LLNKEHASPR LVYALAARLS
RLSPHQLRQV VREAANWLRR NTQRLDSISH QMFWDLWQAC AESLRCEPFD DPAGKRNRSW
IEQSVDSAAA RLAESAFLVD SDLDTPVILS ELTTRIVQLL QLPAPFRQHA IFRIAMRFEV
FFAKDSQWTT ETLLPLSSSQ GNDSAAFWQG YLYRTTTLSP KAFALFKDVL ISHVRDRTLL
KGGSALIAAT LLDRWMQRTE AACAEEAMSD SELREILVLS DEEFRDELVR TLARWTKESP
AKYDDQVLYF LEKVWPLQKV VKNARMTARL VDLAFAVSDR FSEAVKLIVP KVVIAPRELS
MRYYKVDERV VQSHGPALVD LLWQTLPTAA SMWPDDVDNL LTELQRLPTL NGSAKLSTLL
RRSKYRR
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