| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6299 |
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| Symbol | |
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| ID | 4036737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 154479 |
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| End bp | 155723 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975325 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_582108 |
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| Protein GI | 94152706 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.627257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGCA AACAAAATGC GGACAACGTC ACCGACGTGA CGGACGCGCA GGAACGGACC
GTCAAGGGGA AGCTCCCGCG CAATGTCGTC CTCGCACTGG GTGGTGCGGC GGCACTGATG
GTTGGCGCCC TGGGCTATTA CTTCCAGACC GTCTCGGACG AGCAGATCGA CGCCAAGGCT
CAGCAAGCGC GAGCCGATGA AATCAAGCAA CGTGCCGGCA GCGCGGATAC CGGGCAGAGC
CTGGATGCGG TCATTCGTGC GCAGGCGGAC AAGGCGCGTG AGGAATCCGA GAAACAGCGC
AAACTGGCCA TTGCGACGGA TACCAAGGCG CCCGTCATGA CCGCCGGCGA TCTCACTAGC
GCGGCGAAAG CCACAGGCGC TGCGCCGGAT GCGAAGAAGA ATGCGGAAGA TGACCTCTTC
ACGTCCTCAG TATTCAAGAG CGGGACACGC AAGTCCCAGG TCGCACAGGT AAAGCAGCCG
TCAGGCATGC CGGACGTGAC GGATCCCGCG CAGATGCGTG CAATCCAGCA GGCTGTCGCG
GCAAAGGCGG CCGCCGCGAA TGCTGCGGGG GCGACCCCGG AGGGCGTTGC GCCGCAGGCA
TCCTCGTCGG ATCGCCAGTT CCTGCGCGAC GCGGGAAGTC TGAACACGCT GCGAACCGGG
TTCGACGGCA AGCTGCCGCG CTGCACGCTG AGCCGCGGCT TCGTGATTCC CGCCAACTTC
GCCGGCGGCC TCAACTCGGA CAAGCCGGGT GAGTTTCGTG CAACGGTATC GCAGGACGTC
TACGACACCG TCAAGGGTAC GTGCAAAATT ATTCCGGCCG GCACCACGTT GGTTGGGATG
TATAGCGCAG ACATTGCTGT GGGCCAGGAA CGCATCCTGA CCGCTTTCGT GCGCATGCAA
CTGCCAAATG GGAAAACCGT TCCCCTGATG GGCATGCAGG GTGCGGACCC GGACGGCACG
GCTGGCAATA CAGGCGACGT CAACAACCAC TTCCTCAAGA TCTTCGGCGG TGCGCTCGTG
ATCGGCGCCC TGTCGCTGCG TTTCAACGAC AACCCGACAA CTACCACGGT AGGACCCTCG
GGTCTGGTGG CGTACGGCAA TGCGGCCGGA CAGGTAGCGA CCCAGACGGC GCAGACGATT
CTGAACCGCA ACCAGAACAT CCGCCCGACC ATCACCACCG AGCCGGGGCA GAAGATGATG
GTGCAGGTCA AGCACGATAT CGTCCTGGAG CCGTATCGTG ACTAA
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| Protein sequence | MRGKQNADNV TDVTDAQERT VKGKLPRNVV LALGGAAALM VGALGYYFQT VSDEQIDAKA
QQARADEIKQ RAGSADTGQS LDAVIRAQAD KAREESEKQR KLAIATDTKA PVMTAGDLTS
AAKATGAAPD AKKNAEDDLF TSSVFKSGTR KSQVAQVKQP SGMPDVTDPA QMRAIQQAVA
AKAAAANAAG ATPEGVAPQA SSSDRQFLRD AGSLNTLRTG FDGKLPRCTL SRGFVIPANF
AGGLNSDKPG EFRATVSQDV YDTVKGTCKI IPAGTTLVGM YSADIAVGQE RILTAFVRMQ
LPNGKTVPLM GMQGADPDGT AGNTGDVNNH FLKIFGGALV IGALSLRFND NPTTTTVGPS
GLVAYGNAAG QVATQTAQTI LNRNQNIRPT ITTEPGQKMM VQVKHDIVLE PYRD
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