| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6296 |
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| Symbol | |
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| ID | 4036734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 152047 |
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| End bp | 152469 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975322 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_582105 |
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| Protein GI | 94152703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.270773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGT TGCGAATCGG GCTCCTGATC GCCGGGACCG CGTTTGCGAG CTTGGTCCGC
GCCGACTGTC TGGACGATGC GGCCGCGTTC CATCGCGTGA GTCCCATCCT TGCCCGCGGC
ATCGCGCAGG TCGAGTCCGG CATGCGGTCG TGGGTGACCA ACCGCAACAG CAACGGCAGC
GAGGACATCG GCCTCATGCA GATCAATTCT GCCCATCTGC CTCGCCTGGC GAAGTTCGGA
ATCACTCGGC AGAGCCTCTT CGATCCATGC ACCAACGCTT ACGTCGGCAC ATGGATCCTC
GCCGATTGCC TCAGCCGATA CGGCGAGACG TGGACTGCGG TCGGTTGCTA CAACGCCGGC
TCGCCGGATA AGCGGCTGCG GTACGCCAAT CGCGTCTACC AGAAGCTGCA ATCGACCAAG
TAA
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| Protein sequence | MIALRIGLLI AGTAFASLVR ADCLDDAAAF HRVSPILARG IAQVESGMRS WVTNRNSNGS
EDIGLMQINS AHLPRLAKFG ITRQSLFDPC TNAYVGTWIL ADCLSRYGET WTAVGCYNAG
SPDKRLRYAN RVYQKLQSTK
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