| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6253 |
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| Symbol | |
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| ID | 4036691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 99868 |
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| End bp | 101526 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637975279 |
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| Product | phage integrase |
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| Protein accession | YP_582062 |
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| Protein GI | 94152660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC GACGTCAAAA ACTTGATCGC AAAGCCAGCG CCCAGATTCA AGGCGGCCGG
GTCATTGACC TGGCGCCCGG CTGGTCTTTC TCGCTCGTTT GCCCTCACCA GGGCGAGCAG
CGGTTCGATT TTAAAGAGTA TCGTGCGCGC GGCCGCGAGA ATCTTGCAGC GCATATGCGC
GACGCCGCCT GGAGTCTACG CAATGAGCTA GGCGCCTACA CCCTGACTTC CTATGTTAGC
TTTCTGCGCC GCTTCTGGCT GTTTCTTGAC GACCTGTCCG CAAAGGGCGA GGATATTGTT
GCTCTCAACC AGATTACGCG GTCGTTGATT GAACGGTATC TGGCGTGGAT GGAACGCCAG
ATCATCGTCG CCACCCAAAA CCGTGGGCAG ATTTGGTCGA TAGGGACTCG GCGCACTGCC
TACAAGGCCC TCAAGGCATT CCTCGTAGCA AGGCAAAAGC GGGTTCCCGA CGAGGTAAGC
GATCAGCTGA CTTTTCCGCG CAACCCATTT CCCAACGCAA ACAGTCACTC CTCCAAGCGC
CAGCCCTATT CGGACAGAGA GCAGAAGCGA CTTCTTGCGG CGCTGAATCA AGATTTGCGC
ACCATCCACG AGGGCGTCGG AGCACCCCTC TCGGAATTGC AGGTGCTCGT CGTTCACCTG
CTATTGTTTG CTCTTGCAAC GGGCATTAAT CAGCAGCCGT TGCTGGATCT CAAGCGGGAT
AGTTTTCGAC CCCATCCCCT CCCAGACAGA GAATTGCTGG TCACGCTCAA ACGTCGAGGC
TATTCCGTCC AGAACACGTC CGTCCGCGCG GCCGAGGCAC CAGTTGCTAC CGCAAATATG
CAATCGGTCC CGTCCACGAT CGGCGAACAC TTCCGGTTTC TGTGCCAGTT CACTGAATCT
GTCGCCGATG ACGCTGCACC GCGTGACCGC GAGTATGTGT TCCTGCGTCG CGGACTTCTC
AACGAGCGCA AAGGCGTTGT ATCTCGACTG TCCGCGAGAG ATGCCAAGAA TGCCGTCGCG
ATCTTCATGC GCCGGCACAA ATTGGAGGAT GATCGCGGCC AGCCTCTGCA GGTCAGAGTC
GCGCGCTTAC GCCCGACGTT TGCTACGGAG TTATACCGCC GCACCCGTGA CTTGCGCCGC
GTGCAACGGG CACTCGGGCA CGCGAGCGTC TCCACCACTG CCCGTCACTA CGTCGACTCA
CCCATCGAGG CTGAGCGTGA TCATGCCTTT GTCCTCGATG GGATGGTCAG CAGCTTCACT
AAGCAAGACG TTTCTGGCAA AGTCCTTATC GCTGCCGACG GGTTAATCCC CGCGGCGAAC
ATAAAAGACC TCCTCTCGGG TGGATACAAC ACCGGCGTCG CGCGGTGTCG AAATCCATTT
CGGGATGACG CGTCCGTTTG CAAGAAGTTC TTTACCTGCT TCGGCTGTCC AAATATGGTG
GTCTTCGAAG ATGACCTGTG GCGGCTCTTC AGCTTCTACT ACCGCTTGAT CTCCGAACGG
CCGAAGATCA ATGCCGCGCA CTGGCTGAAG ACCTACGCTC CGATTATCCG GCGCATTGAT
ACCGATATCG CACCGCAGTT TCCGAAGGAC AAAGTCACTG AGGCGCGAGC GCGTGCCCAA
CAAAATCCCC ATCCGACCTG GCGTGGTATC GCCCTATGA
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| Protein sequence | MAIRRQKLDR KASAQIQGGR VIDLAPGWSF SLVCPHQGEQ RFDFKEYRAR GRENLAAHMR
DAAWSLRNEL GAYTLTSYVS FLRRFWLFLD DLSAKGEDIV ALNQITRSLI ERYLAWMERQ
IIVATQNRGQ IWSIGTRRTA YKALKAFLVA RQKRVPDEVS DQLTFPRNPF PNANSHSSKR
QPYSDREQKR LLAALNQDLR TIHEGVGAPL SELQVLVVHL LLFALATGIN QQPLLDLKRD
SFRPHPLPDR ELLVTLKRRG YSVQNTSVRA AEAPVATANM QSVPSTIGEH FRFLCQFTES
VADDAAPRDR EYVFLRRGLL NERKGVVSRL SARDAKNAVA IFMRRHKLED DRGQPLQVRV
ARLRPTFATE LYRRTRDLRR VQRALGHASV STTARHYVDS PIEAERDHAF VLDGMVSSFT
KQDVSGKVLI AADGLIPAAN IKDLLSGGYN TGVARCRNPF RDDASVCKKF FTCFGCPNMV
VFEDDLWRLF SFYYRLISER PKINAAHWLK TYAPIIRRID TDIAPQFPKD KVTEARARAQ
QNPHPTWRGI AL
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