Gene Rmet_6233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6233 
Symbol 
ID4036671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp82790 
End bp83263 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID637975259 
Productputative outer membrane lipoprotein transmembrane 
Protein accessionYP_582042 
Protein GI94152640 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.0997303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GTATCGCTTC GCTTTTCCTT GCTTCGATCA TCTTCACCGG CTGCGCAGCT 
CAGCAGACGT CTCCGAACAG CTATCGCAGT TCGGAAGCGC TCCGCACGGG TTCCGCGGAA
GTCGTCACTG TCATTCGTCT CCGTCAGGTG ACGATCATCG ACAGTGACGG CTACTCGTCG
GCCAACAGCG GTATCCCCGG TGTTGTCGGC GCGTTGGTCG GTGGATTGCT CGGCGCGCGT
GTGATTGGCG GCGGCAATGG CCGCTATGTC GCAGGTGCGA TGTCCGGTAC CGTTTCCGCG
GTGCTGGCGC AGGGCGTTGC CTCGCAGCTC AACCGGCGTG CAGGCGTCGA GGTCGTTGTC
CGCAAGGAGA ATGGCAGCCA GATCGTTCTC ACGCAGGATG CCGATCAGCA GTTCACGACT
GGCGAGCAGC TGTACCTCGT GTCGTCGGGT AACGGCTACC GTCTTACGCG TTAA
 
Protein sequence
MFKRIASLFL ASIIFTGCAA QQTSPNSYRS SEALRTGSAE VVTVIRLRQV TIIDSDGYSS 
ANSGIPGVVG ALVGGLLGAR VIGGGNGRYV AGAMSGTVSA VLAQGVASQL NRRAGVEVVV
RKENGSQIVL TQDADQQFTT GEQLYLVSSG NGYRLTR