| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5989 |
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| Symbol | |
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| ID | 4036524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007971 |
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| Strand | - |
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| Start bp | 66878 |
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| End bp | 69199 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Cytochrome c |
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| Protein accession | YP_581798 |
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| Protein GI | 94152391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.278439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCG GAAGCGTGTG TTGTGTAGCC GCCAGCACTG CGGCAGCTTC AATCAAAAAT
TGCGTACATA TGCGTAAAAG CACGAATCTC TGGCAGATCA CAACGGCCTC AATCGCATTT
GCGGCATTGG CGACCTTGCA GTGGGGGGCG CAGGCGCAAC AGCCGCAGTC CATTGTCGCG
CCGGCCTCTG CTGCTTCTGC GGCTGCAGCG CACGCTCCGG CGGCTGAATC CCTTCCGTCT
GCGCATGCTC AGTTGCCGCA GGTGATTGAC GACCTGCCGG CGAACTATGC CAGTGGCATG
GACCAGGCCA CCCGCGCACA AGTGGAGCGT GGGCGCTATG TGGCCCGCCT GGGTGATTGC
GTGGCATGCC ACACCAGCGA TAAGACCAAG CCGATGGCAG GCGGGCTTCC GCTGAAGACA
CCGTTCGGTA CGCTGTATTC GACCAACATC ACGCCGGACG CCGCCACAGG CATTGGGCGC
TATACCTTCG AGCAGTTTGA CCGGGCGATG CGCAAGGGCG TGGCTGCGGA TGGCCACAAT
CTCTATCCGG CCATGCCGTA TCCGTCCTAC GCCAAGACCA CGCCGGAGGA CATGCGGGCA
CTGTATGTCT ATCTGATGAA GGGCGTGGCG CCGGTACAGC TGGCCAACAA GCCGCTGGGC
ATGTCGTTTC CCTTCAACCA GCGCTGGGGG CTCACCTTTT GGAAATGGGC GTTTCTGGAA
GACAAGCCTT TCCAGCCGGA TGCGTCGCAG TCTCCGGCGT GGAACCGGGG CGCCTACATC
GTACAGGGCA TGGGCCATTG CGGTGCCTGC CATACGCCGC GCGGCATTGG TTTCCAGGAA
AAGACCATGA CCGAAGCCGG AGCCAGCGGC AAGTACTTTC TGGCGGGTGA AACCGTGGAA
GGCTGGCGTG CCCTCAGTCT GCGCAGCCTC TGGACGCCGC AGGACGTGGC TGAAATGCTC
AAGACCGGTC GCAACCGCCA TGGCATCGTC TCGGGCAACA TGGTGGATGT GGTACAGCAC
AGTACGCAGT ACATGAGGGA CAGCGATTTG CTGGCCGTTG GTACCTACCT CGGGTCCTTG
CCTTCCAGCG ACAAAGACAA ACCGATGCAG GTGGCGCAAG GGCCTGCTCC GGCGATTGTT
GCTCCCGGCT CGAGCACAGC CAGCCTGGCC ACGCAGAGTT CAGCGGGCTC TCCGGACCAG
CCGGCAGATT TGTTCACGAG CCGCGGTGGA CTGGGCTATC TGCAGTTCTG CGCCGATTGC
CATCGAAGCA ACGGCGACGG CGTGCCCAAC GTGTTCCCGC CCCTGGCAGG CAACCCCGTG
CTGAGCGACA GCAGTGCAGC CACGCTGCTG CACATCATGC TGACCGGCTC TGCCACGGCG
CAGACGGTCA GCCATGCACG GGTACTGACC ATGCCGTCGT TTGCACGGTT GGACGATGGA
GAAATTGCCG ACATTGTGAA CTTCACCCGC AAGAGCTGGG GGAACGCCAA GGCGCAGCCC
GTTGTGGCGG CCGACGTCAG CAAGACGCGC AAGGAGCTGG AGATCAAGAA GCTGGATGCC
AGCAAGTTTG ATACGCCTCG TCTGGCCGCC ATGCTCAAGG AGCCCAATGC CAAGCAGTTA
GTGTTGGGGG CGCGCCTGAA CATCGATACG CATAACTTGC TGCCCAAGAA TGTGGGTAAC
AAGCTCAACT GCGCAAGCTG CCACCTGAAT GCAGGCACGG TGGCCGACGG CTCTCCATAT
GTAGGCATCT CCGCCTTCTT CCCCAGCTAC GCGCCGCGTG CCGGGAGGGT GATTACGCTC
GCCGAGCGTA TCAACGGTTG TTTCCAGCGC TCCATGCACG GTAAGCCTTT GCCGGTGGAT
TCTGAAGAGA TGAAAGCCAT GGTGGCCTAC TTTGACTGGA TGAAACGCGA GACCAAGCCC
GCGGACAAGG TGGCCGGACG TGGTGTGGGC AAGATCGACA AGACCATCGT GCCCAATGTA
GAGAATGGCC GGAAGATCTA CACCGCACAA TGCGCACTGT GCCACGGCGC CAACGGCGAG
GGCATCACCA ACGCACACGG CGCTTACGTT TATCCGCCGC TTTGGGGTGA CCAGTCCTTC
AATATTGGTG CCGGCATGGC CCGGACCTAT ACTGCGGCGG CGTTTGTGAA GAACAACATG
CCGATTGCGT TCCACAATAA ATTTCCGCTC GGGCAAGGTG GGTTGACTGA TCAGGAAGCT
GTGGATGTGG CGGAGTACTT CACTCATATG CCGCGCCCGG ACTTTGCGGC CAAGGTCAAA
GACTGGCCAA AGGACAAAAA GCCATCGGAC GCCCGTTACT AA
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| Protein sequence | MLIGSVCCVA ASTAAASIKN CVHMRKSTNL WQITTASIAF AALATLQWGA QAQQPQSIVA
PASAASAAAA HAPAAESLPS AHAQLPQVID DLPANYASGM DQATRAQVER GRYVARLGDC
VACHTSDKTK PMAGGLPLKT PFGTLYSTNI TPDAATGIGR YTFEQFDRAM RKGVAADGHN
LYPAMPYPSY AKTTPEDMRA LYVYLMKGVA PVQLANKPLG MSFPFNQRWG LTFWKWAFLE
DKPFQPDASQ SPAWNRGAYI VQGMGHCGAC HTPRGIGFQE KTMTEAGASG KYFLAGETVE
GWRALSLRSL WTPQDVAEML KTGRNRHGIV SGNMVDVVQH STQYMRDSDL LAVGTYLGSL
PSSDKDKPMQ VAQGPAPAIV APGSSTASLA TQSSAGSPDQ PADLFTSRGG LGYLQFCADC
HRSNGDGVPN VFPPLAGNPV LSDSSAATLL HIMLTGSATA QTVSHARVLT MPSFARLDDG
EIADIVNFTR KSWGNAKAQP VVAADVSKTR KELEIKKLDA SKFDTPRLAA MLKEPNAKQL
VLGARLNIDT HNLLPKNVGN KLNCASCHLN AGTVADGSPY VGISAFFPSY APRAGRVITL
AERINGCFQR SMHGKPLPVD SEEMKAMVAY FDWMKRETKP ADKVAGRGVG KIDKTIVPNV
ENGRKIYTAQ CALCHGANGE GITNAHGAYV YPPLWGDQSF NIGAGMARTY TAAAFVKNNM
PIAFHNKFPL GQGGLTDQEA VDVAEYFTHM PRPDFAAKVK DWPKDKKPSD ARY
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