Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5979 |
Symbol | czcD |
ID | 4036514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 81694 |
End bp | 82644 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | cation diffusion facilitator CzcD |
Protein accession | YP_581788 |
Protein GI | 94152381 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000910181 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0784096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAG GTCACTCACA CGACCATCCC GGTGGCAACG AGCGATCGCT CAAGATCGCC CTTGCGCTGA CCGGTACGTT CCTGATTGCC GAAGTGGTCG GTGGTGTCAT GACGAAGAGC CTGGCGTTGA TCTCCGACGC CGCGCACATG CTCACGGACA CCGTCGCACT GGCCATCGCA CTGGCTGCTA TTGCGATCGC CAAGCGACCC GCGGACAAGA AGCGGACATT TGGCTACTAC CGTTTTGAGA TTCTTGCCGC GGCCTTTAAC GCATTGCTGC TGTTCGGTGT GGCTATCTAC ATCCTGTACG AAGCCTACCT GCGGCTGAAA TCGCCACCTC AGATTGAGTC AACCGGCATG TTCGTCGTGG CTGTGCTGGG CCTGATCATC AATCTCATCA GCATGCGCAT GCTGTCCTCC GGGCAAAGCA GCAGCCTGAA CGTGAAGGGT GCTTATCTGG AAGTCTGGAG CGATCTGCTC GGGTCGGTTG GCGTCATCGC CGGTGCGATC ATCATCCGCT TCACGGGCTG GGCGTGGGTC GACTCCGCCA TTGCGGTGCT GATCGGCCTC TGGGTACTGC CTCGCACGTG GATCCTGCTG AAGTCGAGCC TGAATGTGCT GCTCGAAGGC GTACCCGATG ACGTGGATCT GGCAGAGGTT GAGAAGCAAA TTCTGGCGAC GCCCGGGGTA AAAAGCTTCC ATGACCTCCA CATCTGGGCA CTTACCAGCG GCAAGGCGAG CTTGACGGTT CATGTCGTGA ATGACACGGC CGTCAACCCG GAAATGGAAG TGCTACCGGA ATTGAAGCAG ATGCTGGCTG ACAAATTCGA TATCACGCAC GTGACCATTC AGTTCGAACT GGCACCATGC GAACAAGCGG ATGCAGCTCA GCATTTCAAT GCATCGCCAG CACTGGTCGG ATCGAAGTCG CTTGCTGCAG GAGGAAACTA A
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Protein sequence | MGAGHSHDHP GGNERSLKIA LALTGTFLIA EVVGGVMTKS LALISDAAHM LTDTVALAIA LAAIAIAKRP ADKKRTFGYY RFEILAAAFN ALLLFGVAIY ILYEAYLRLK SPPQIESTGM FVVAVLGLII NLISMRMLSS GQSSSLNVKG AYLEVWSDLL GSVGVIAGAI IIRFTGWAWV DSAIAVLIGL WVLPRTWILL KSSLNVLLEG VPDDVDLAEV EKQILATPGV KSFHDLHIWA LTSGKASLTV HVVNDTAVNP EMEVLPELKQ MLADKFDITH VTIQFELAPC EQADAAQHFN ASPALVGSKS LAAGGN
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