Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5978 |
Symbol | czcR |
ID | 4036513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 82646 |
End bp | 83323 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | regulatory protein CzcR |
Protein accession | YP_581787 |
Protein GI | 94152380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000269255 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0723212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTAC TTGTTGTAGA AGACGAACCG CGTACTGCGG AGTATTTGCA GAAGGGATTG TCGGAGTCGG GTTTCGTGGT CGACATCGCG AACAATGGTG GCGATGGGCT CCACATGGCG GAAGAGACCG ACTACGACGT CATCATCCTG GACGTCATGC TGCCAGGTAT GGACGGGTGG ACGGTCATCA AGTCCATTCG ATCCAAGTCC GAGACACCCG TACTGTTTCT GACGGCGCTG GATGATGTGG CGGATCGTGT CAGAGGCTTC GAGTTGGGGG CAGACGATTA CCTGGTCAAG CCCTTCGCCT TTGCCGAGCT CCTTGCCCGT ATCCGGCGTT GCTTGCGCCA AAGCACCTCG AAGGAGTCCG AGCGATTGCG CATTGCCGAT CTGGACATCG ACGTGCTTGG AAGGCGGGTA TTCCGGGGAA CTACCCGCAT TGAATTGACG AATCAGGAGT TCTCGCTGTT GCACCTGCTC ATGCGCCGGA GAGGGGAGGT GCTGTCGCGA ACCACGATCG CGTCCCAGGT CTGGGGCGTC AACTTCGACA CGGATACCAA TGTCGTTGAC GTCGCGATCC GGCGCCTGAG ATCCAAGGTG GATGATCCCT TCGATCAAAA GCTGATCCAT ACCGTACGGG GAATGGGCTA TGTCCTCGAC CCAGAGCGCG GCCGGTGA
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Protein sequence | MRVLVVEDEP RTAEYLQKGL SESGFVVDIA NNGGDGLHMA EETDYDVIIL DVMLPGMDGW TVIKSIRSKS ETPVLFLTAL DDVADRVRGF ELGADDYLVK PFAFAELLAR IRRCLRQSTS KESERLRIAD LDIDVLGRRV FRGTTRIELT NQEFSLLHLL MRRRGEVLSR TTIASQVWGV NFDTDTNVVD VAIRRLRSKV DDPFDQKLIH TVRGMGYVLD PERGR
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