| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2472 |
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| Symbol | trmE |
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| ID | 4035085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 3055907 |
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| End bp | 3057370 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637974965 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_581733 |
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| Protein GI | 93007296 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000689916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGAGTGC TTGTGGATTC CCAAGAGTTG GCGTTAGCCG CCCCTGAGTC ATCAAAAAAT
CTCGGTTTGT CGAGTCTGCC TACCATTGCC GCTATTGCTA CACCGCTTGG ACGGGGTGGG
GTCGGGGTTA TTCGTCTGTC TGGTACACAT GCGTATAGCA TTGCTTGTAC GCTGACAGGT
AAGTCAGCAT TTAAACCGCG CATGGCGAGC TTCTGCCGAT TTTATCAAGC AGATGGTACG
GTTATCGATG AAGGGTTGGT GCTGTATTTT AAGGGTCCGC ACTCGTTTAC TGGCGAAGAT
GTGATTGAAC TGCAAGGTCA TGGTGGCATG ATTTTGCAAA ATCAGTTGTT GGCACGTGTG
TTTGAGTTAG GGGCGAAACA AGCAAGTGCT GGAGAATTCT CTTATCGTGC CTTTGATAAT
GATAAGTTGG ATTTGGTACA GGCAGAAGCC ATTGCAGATG CGATTGATGC TACCAGCGCT
GCTGCTGCCA GCAGTGCTAT TCGCTCCTTA AGCGGTGAAT TCTCGCAAAA GATTAATCAG
CTACTTGAGC AGTTAATTCA TCTGCGTCTG CATGTTGAAG CAGCTATTGA TTTCCCTGAT
GAAGAAGACG TTGATTTTTT ATCAGATGGG GTCATACAAG GTAAGCTTGA ACAGACACAA
GAAAAAATCC AGCAGGTCTT GGCGACTGCT AAGCAAGGAC AATTATTACG TGATGGTATT
CATGTGGTGT TGGCAGGTAG ACCTAATGCT GGTAAATCAA GCCTGCTCAA TCGCTTGGCA
GGGCAAGAGC GTGCTATCGT CACTGATGTG GCGGGTACAA CGCGTGATAC ACTACAAGAA
ACCGTTGTCC TCAATGGTTT GACGCTACAC TTGACTGATA CGGCAGGCCT GCGCGAGACA
GAAGACACGG TCGAGCGTAT CGGCATTGAG CGCGCGCGGA CAGCGATTGC TCAGGCAGAT
ATGCTGTTAA TGGTTTATGA TGTAACCCGT GATCTTGAAG AAGAAAGTAC CCCATTACAG
CTCGCTGAGC AGCTATTTGG CGAGCTACCA GAAGCCAAGC GCTTGTTAAT TATCGCTAAT
AAAAGTGATT TATTAAACAA TAATAGCAGC AAAGAAATAA CCTCTATTTC GCAACAAGAG
ATTCATAATC GCGGTTACGA GCAAGTTAAT GTTTCATGTG AAACAGGCGC AGGTATTGAT
GATTTAGTCG AAACTCTGTG TGCTAAAGTA GGGTTTCATC CACCCGAAAA TAGCTTGATA
GCTCGTACGC GTCATCTAGA TGCGTTAAGA AGAACGGCCG AATATTTAGC AGAAGCTCAT
GAGCAGCTAA CCGTCTTTAA AGCGGGTGAA TTAGTTGCTG AAAGTTTGCG TCAAGCTCAG
CATAGTCTGG GCGAGATTAC CGGGGAGTTT AGTGCAGATG ATTTGTTGGG CAAGATTTTT
GGCAGTTTTT GCATTGGTAA ATAA
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| Protein sequence | MRVLVDSQEL ALAAPESSKN LGLSSLPTIA AIATPLGRGG VGVIRLSGTH AYSIACTLTG
KSAFKPRMAS FCRFYQADGT VIDEGLVLYF KGPHSFTGED VIELQGHGGM ILQNQLLARV
FELGAKQASA GEFSYRAFDN DKLDLVQAEA IADAIDATSA AAASSAIRSL SGEFSQKINQ
LLEQLIHLRL HVEAAIDFPD EEDVDFLSDG VIQGKLEQTQ EKIQQVLATA KQGQLLRDGI
HVVLAGRPNA GKSSLLNRLA GQERAIVTDV AGTTRDTLQE TVVLNGLTLH LTDTAGLRET
EDTVERIGIE RARTAIAQAD MLLMVYDVTR DLEEESTPLQ LAEQLFGELP EAKRLLIIAN
KSDLLNNNSS KEITSISQQE IHNRGYEQVN VSCETGAGID DLVETLCAKV GFHPPENSLI
ARTRHLDALR RTAEYLAEAH EQLTVFKAGE LVAESLRQAQ HSLGEITGEF SADDLLGKIF
GSFCIGK
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