Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2343 |
Symbol | murD |
ID | 4035744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2873186 |
End bp | 2874601 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637974822 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_581604 |
Protein GI | 93007167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.6817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTA GCACCGCAAC AGAAACCTTA CTTCATAAAG GCAGTGGTTT ACAAGTCGTG GTCGGTTTGG GGCAGTCGGG GTTATCGGTC GCGCATTATT TGGCCGAGCA AGGCTACCAA GTTGCCGTCA CTGACAATCA AGAAAATCCT GCGTTAGCAA ATAAGCTACC TGCTACTATT GATATCAGGC AGTTTGGTGC GATCGATGCC GAATTATTAC AACAAGCGGC ACGGATTATT ATCAGCCCTG GTATCTCTTT AGATAATGTC GCCATTGCCG CGGCACGAGC TGCAAATATT CCAGTGGTCA GTGATATTCA GCTATTTTGT GAGGCTTGTA CGGTACCAAT CGTTGCGATT ACAGGTTCAA ATGCCAAGAG CACCGTTACG ACACTGGTCG GACAAATGGC GGCAGATGCA GGTATCAATG TTGGCGTAGG CGGTAATATT GGTGTGCCAG CGCTGAGCCT ACTGAGTAAT AAAGAGATGG AGCTGGCGGT TATAGAGTTA TCCAGCTTTC AGTTAGAAAC GGTCACCAAC TTAGGAGCGC AGGTCGCGAC AGTCCTCAAT ATGTCGCCTG ATCACTTAGA TCGTCATGGC GATATGCTCG GCTATCACCA AGCCAAACAC CGTATCTTTC AAGGTGCCAA ATCAGTAGTG ATTAATCGAG AAGATGCTTT GACGCGGCCA CTGGTATCAG ACAGTTTGCC AAGATTGAGT ACTGGTATCC ATGCGCCTAA TAAAGGACAT TATGGACTTA TTACGGATAC CGCCGGACAG ACTTATTTAG CACGCGGCAC AGAGCGTCTA ATATCGGCAG ACAAACTCAA GATAAAAGGG CGTCATAACC TGCTCAATGC CCAAGCAGCG TTGGCATTGG GCGAGCTTGC TGGTTTGCCG CTTGAAATTA TGCTCATTAC TTTGCAGCAG TTTGCAGGGC TTGAGCATCG CTGCCAATAT GTCTCTACAG TCGCTGGCAT TGATTATTTT AATGACTCTA AAGGCACTAA TATTGGCTCA ACTATGGCGG CTGTTGAAGG TTTAGGTGCA GTTTATGCGC CAAAAGACGG TAAGCTGCTA TTAATATTGG GCGGTCAAGG TAAAGGTCAG CAGTTCGGTG AACTTTCGCC CTTTATCAAT CAATACGTGA GTCAAGTGCT GTTTATTGGT GAAGATGGTA AGCAGATTGA GCAGCATTTA CGCGCAGCGG GTCTCAGCGA TGAGGTCAGC CTACATCAAT GTCAGACATT AGAAAATGCT TTTGCGACGA TTGAGCAAGT AACAGCAAGT AGTTTGTCGC AAGTACAGGC AGTGTTATTG TCACCTGCTT GTGCAAGCTT CGATCAGTTT GATGGGTTTG TCGCGCGCGG CGAGCACTTT AGCCAGCTCG TTAAACAATT GGATGTTGTG TCTTAA
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Protein sequence | MTASTATETL LHKGSGLQVV VGLGQSGLSV AHYLAEQGYQ VAVTDNQENP ALANKLPATI DIRQFGAIDA ELLQQAARII ISPGISLDNV AIAAARAANI PVVSDIQLFC EACTVPIVAI TGSNAKSTVT TLVGQMAADA GINVGVGGNI GVPALSLLSN KEMELAVIEL SSFQLETVTN LGAQVATVLN MSPDHLDRHG DMLGYHQAKH RIFQGAKSVV INREDALTRP LVSDSLPRLS TGIHAPNKGH YGLITDTAGQ TYLARGTERL ISADKLKIKG RHNLLNAQAA LALGELAGLP LEIMLITLQQ FAGLEHRCQY VSTVAGIDYF NDSKGTNIGS TMAAVEGLGA VYAPKDGKLL LILGGQGKGQ QFGELSPFIN QYVSQVLFIG EDGKQIEQHL RAAGLSDEVS LHQCQTLENA FATIEQVTAS SLSQVQAVLL SPACASFDQF DGFVARGEHF SQLVKQLDVV S
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