Gene Pcryo_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2154 
Symbolrph 
ID4033729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2636883 
End bp2637599 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content47% 
IMG OID637974627 
Productribonuclease PH 
Protein accessionYP_581415 
Protein GI93006978 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTG ACAACCGTGA GCTTAATCAA CTTCGCTCAA TCAGCTTTGA GCGCCATTAC 
ACTAAGCATG CTGAAGGGTC AGTATTGGTC AGCTTTGGCG ACACCAAAGT ACTGTGCACC
GCAAGTGTAG AGTCTGGCGT ACCGCGTTGG CTCAAAGGTA AAGGCAAAGG CTGGATCACG
GCTGAATATG GCATGTTGCC ACGCGCGACC AATACTCGTA ATCAACGTGA AGCGGCTCGC
GGTAAGCAAT CAGGTCGTAC TCAAGAAATT CAGCGTTTAA TCGGTCGTAG TTTACGTGCC
ATGATTGATT TGAGTAAGCT TGGCGAAAAT ACCATTTACT TAGATTGTGA TGTCTTGCAA
GCGGATGGTG GTACTCGTAC TGCTAGTGTG ACCGGTGCCG CGATTGCCCT TATCGATGCC
TTAGAGAGCA TCCAAAAAAC TAAGAAACTA AAAGCGGATC CATTGATTGG TTTGGTTGCT
GCCGTTTCTG TTGGTATGAA AGATGGTAAA GCGTACTTGG ATTTAAACTA CGAAGAAGAT
GCCAGCTGTG ATACGGATTT GAACGTGGTG ATGACCCAAA AAGGCGAGTT CATTGAGCTA
CAAGGGACGG CGGAAGAAAA GCCATTTACT CGTGCTCAAG CTGACGATAT GCTTATTCTA
GCCGAAAAAG GTATCGCTGA GCTGATTGCT ATGCAAAAAA CCGCCTTAGG TTGGTAG
 
Protein sequence
MRIDNRELNQ LRSISFERHY TKHAEGSVLV SFGDTKVLCT ASVESGVPRW LKGKGKGWIT 
AEYGMLPRAT NTRNQREAAR GKQSGRTQEI QRLIGRSLRA MIDLSKLGEN TIYLDCDVLQ
ADGGTRTASV TGAAIALIDA LESIQKTKKL KADPLIGLVA AVSVGMKDGK AYLDLNYEED
ASCDTDLNVV MTQKGEFIEL QGTAEEKPFT RAQADDMLIL AEKGIAELIA MQKTALGW