Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2154 |
Symbol | rph |
ID | 4033729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2636883 |
End bp | 2637599 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637974627 |
Product | ribonuclease PH |
Protein accession | YP_581415 |
Protein GI | 93006978 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTG ACAACCGTGA GCTTAATCAA CTTCGCTCAA TCAGCTTTGA GCGCCATTAC ACTAAGCATG CTGAAGGGTC AGTATTGGTC AGCTTTGGCG ACACCAAAGT ACTGTGCACC GCAAGTGTAG AGTCTGGCGT ACCGCGTTGG CTCAAAGGTA AAGGCAAAGG CTGGATCACG GCTGAATATG GCATGTTGCC ACGCGCGACC AATACTCGTA ATCAACGTGA AGCGGCTCGC GGTAAGCAAT CAGGTCGTAC TCAAGAAATT CAGCGTTTAA TCGGTCGTAG TTTACGTGCC ATGATTGATT TGAGTAAGCT TGGCGAAAAT ACCATTTACT TAGATTGTGA TGTCTTGCAA GCGGATGGTG GTACTCGTAC TGCTAGTGTG ACCGGTGCCG CGATTGCCCT TATCGATGCC TTAGAGAGCA TCCAAAAAAC TAAGAAACTA AAAGCGGATC CATTGATTGG TTTGGTTGCT GCCGTTTCTG TTGGTATGAA AGATGGTAAA GCGTACTTGG ATTTAAACTA CGAAGAAGAT GCCAGCTGTG ATACGGATTT GAACGTGGTG ATGACCCAAA AAGGCGAGTT CATTGAGCTA CAAGGGACGG CGGAAGAAAA GCCATTTACT CGTGCTCAAG CTGACGATAT GCTTATTCTA GCCGAAAAAG GTATCGCTGA GCTGATTGCT ATGCAAAAAA CCGCCTTAGG TTGGTAG
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Protein sequence | MRIDNRELNQ LRSISFERHY TKHAEGSVLV SFGDTKVLCT ASVESGVPRW LKGKGKGWIT AEYGMLPRAT NTRNQREAAR GKQSGRTQEI QRLIGRSLRA MIDLSKLGEN TIYLDCDVLQ ADGGTRTASV TGAAIALIDA LESIQKTKKL KADPLIGLVA AVSVGMKDGK AYLDLNYEED ASCDTDLNVV MTQKGEFIEL QGTAEEKPFT RAQADDMLIL AEKGIAELIA MQKTALGW
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