Gene Pcryo_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2123 
SymbolnhaA 
ID4034782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2600035 
End bp2601237 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content43% 
IMG OID637974596 
ProductpH-dependent sodium/proton antiporter 
Protein accessionYP_581384 
Protein GI93006947 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAC ATAAAATCAG AGCGTTTTTT AATCTCGAGG CTTCGGGCGG TATCGTCCTA 
GCGCTGGCAG CTATCGCAGC AATGATTATT GCTAATACTT CTCTAAATAC GTGGTACGAA
TCCTTTATTC ACGCACCTGT CGCTATTCAA ATTGGCAGCT TCTCAATCGC TAAAGATGCG
CATCATTGGA TTAATGATGG CTTGATGGCA GTGTTCTTCT TTTTAGTGGG ACTTGAGCTT
AAGCGTGAAG TGTTAATCGG CGAGCTGTCC AATGTAAAGC AAATTATCTT GCCAGCAGGA
GCGGCTCTTG GCGGCATGAT CATGCCAGCC ATCGTCTATC TGTTTTTTAA CTATAATGAA
CCTGAGTTTT GGCGAGGTTG GGCGATTCCT GCCGCAACCG ATATCGCCTT TGCTCTTGGT
ATTTTGAGTT TACTTGGTAA TCGCGTACCC AATTCATTAA AAGTATTCTT AGTCTCGATT
GCTATCTTTG ATGATATCGG CGCGATTATT ATCATCGCTT TATTTTATAC CAATGATTTA
TCACTTGGTT CACTGGCTAT CGCGGGCTTA TGTCTGCCGT TTTTATATCT GCTTAATCGC
CGTAACGTTA CTAGCATAAC TCCTTATTTG CTAATTGGCG TTATCATGTG GGTTGCCGTA
CTCAAATCCG GTATCCATGC AACGTTAGCT GGGGTTGTAT TGGCGCTATT TATTCCTTTA
TTTGATCGCA CTGACCCTGA GCATTCCCCG CTTGAAGAGC TTGAACACGA CCTACAAAAC
ACAGTTTCTT ACGGTATCCT GCCATTATTT GCTTTTGCCA ATGCGGGCAT TTCGCTTAAG
GGCGCAGGGT TTGGTGAGCT GTTTCATTCT GTACCGCTTG GTATTGCCGC TGGACTGTTC
ATCGGTAAAC AAGTAGGCGT CATGCTGATG TGCTGGTTAA TTTTTAAATT GGGCATTTCT
ACTATGCCAA AAGGCATGAA CTTTAAGCAA ATCTACGGCG CAGCATTGTT ATGTGGTGTA
GGCTTTACCA TGAGTTTGTT TATCGGTGGG CTTGCATTTG CCGGTGAGAC ACCATTATTT
GATGAGCGTT TGGGTATCAT TATGGGTTCA ATCGTCTCTG GTATCGCAGG TTATATGATG
CTCAAAGCCA CTTTAAAAGA TGAGGTTAAT GTAACCTCTG TAGACTTAAC GCGTCATTCT
TAA
 
Protein sequence
MAIHKIRAFF NLEASGGIVL ALAAIAAMII ANTSLNTWYE SFIHAPVAIQ IGSFSIAKDA 
HHWINDGLMA VFFFLVGLEL KREVLIGELS NVKQIILPAG AALGGMIMPA IVYLFFNYNE
PEFWRGWAIP AATDIAFALG ILSLLGNRVP NSLKVFLVSI AIFDDIGAII IIALFYTNDL
SLGSLAIAGL CLPFLYLLNR RNVTSITPYL LIGVIMWVAV LKSGIHATLA GVVLALFIPL
FDRTDPEHSP LEELEHDLQN TVSYGILPLF AFANAGISLK GAGFGELFHS VPLGIAAGLF
IGKQVGVMLM CWLIFKLGIS TMPKGMNFKQ IYGAALLCGV GFTMSLFIGG LAFAGETPLF
DERLGIIMGS IVSGIAGYMM LKATLKDEVN VTSVDLTRHS