| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2120 |
|---|
| Symbol | fadE |
|---|
| ID | 4034779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 2593887 |
|---|
| End bp | 2596826 |
|---|
| Gene Length | 2940 bp |
|---|
| Protein Length | 979 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637974593 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_581381 |
|---|
| Protein GI | 93006944 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTG GCTTATTTAT TTTGGCAGTC ATCATTCAAT TAGCCATGGT CTTGGCCATC
TTTTTGTTGT CATTATCGCG TGTCACAGGC AGCATCGTTG CTTTAATCAC TGTCCTCGTT
ACTGCTTTCA TCAGTCCATG GTCGCTTATC CTAGGTCTAC CCATTGCGCT ACTTTGCCTA
GTGCTGCTTA TTACCCCTAT TCGTCAAAGC CTGCTTACCA AGCCTGTCTA TAAAGCCTTG
GGCGGTGCCA TGCCAAGTAT GAGTGACACA GAGCGTGAGG CACTTGATGC AGGTACTAGC
TGGTGGGAAA AAGAGCTGTT TATGGGCGCG CCTGATTGGG ATACGTTTGC AAAATACCCC
TATCCAGAAT TGTCAGAAGA AGAGCAAAGC TTTATAGATA ATGAAGTAGA AGTGCTCTGT
GCAATGCTTG ATGAGTGGCA AATTCATCAT GAAGATAAAG AGCTGTCACC AGAGGCATGG
CGATTTATCA AAGCCAATGG CTTTTTGGGT TTAATTATTC CCAAAGAATA TGGTGGATTA
GACTTTAGCT CATATGCCCA AAGTCGCGTG ATGAGTAAGA TTGCCTCACG CTCGCCGACT
GCTGCAGTGA CCTGTATGGT ACCAAATTCA CTCGGTCCTG GTGAGCTGTT GATGCATTAC
GGTACCGATG AGCAAAAGCA GCGCTGGCTA CCGGGTCTAG CGAAAGGTGA AGAGGTTCCG
TGCTTTGGCT TGACAGGTCC AGAAGCGGGC TCTGATGCCG GTGCGATTCC GGATACTGGC
GTGGTTTGTT ATGGCATGCA TGAAGGCGAG CAAGTGCTGG GCCTGCGCAT GAATTTCTCT
AAGCGTTGGA TTACTTTAGC CCCTATCGCC ACAGTAGTAG GTTTGGCATT TAAAATGCAT
GACCCTGAAG GTTTACTTGG TGATCTTGAA AAAACCGATT ACGGTATTAC TTGTGCGCTG
GTGCCTGCCA GCCACCAAGG GGTCATTATC GGTCCACGCC ACAATCCAAT CGGTTCGCCA
TTTATGAATG GCACAGTCGA TGGTCAAGAT GTCTTTATAC CGCTAGATTA TATTATTGGT
GGAGTGGAAA ATGCAGGACG TGGCTGGCGT ATGCTGATGG AATGCTTGGG CGTCGGTCGC
GGGATCTCAT TGCCTGCCTT ATCGACTTCT GCCAGTGAAA TGAGCTATTT GTCGGTTGGT
GCCTTTGCAA AGGTTCGTGA GCAATTTAAA ATCTCCGTCG GAAAATTTGA AGGCGTGCAA
GATGCCACCA GCCGCATTGC CAGTAATACT TATATGTTAG AAGCTTTTAG GCATCTGGTG
ACTTGTGGTC TAAACCAAGG TGGTACGCCA TCAGTGATGA CAGCAATGGC AAAATACTAT
GCCACTGAGA CCATGCGTTC AGTAATTAAT GATGGTATGG ATGTCGTTGG TGGTCGCGCA
GTACAAATGG GACCGCGCAA CTTTTTAGCC ATTCCTTATC AAGCGATCCC AGTATCAATC
ACCGTTGAGG GCGCCAACAT ATTGACGCGC TCATTGATGA TTTTTGGTCA AGGGGCGATG
CGCTGTCACC CTTATCTATT CGATGAGTTG CAACTACTAC AAAGCGAAGA TAAAGAAGGC
GCGCTCAAGC AGTTCGATAA TTTATTCTTT AAGCATTTGG GCTATACTTT TAATCGCGGT
GCGAAAGCTT TCGTCGCAGG CTATGTTGGT GGCAGCAATG ATGCGCCAAA TTTTGCAGAT
AATTTTACCC GTCCCTATTA CAAAGACATT AACCGCTTAA GCGCAGGCTT TGCTTTAACT
GCTGACATGT CTTTAGGGTT ATTGGCTGGT GATTTAAAAC GCAAAGAGAT GCTATCTGGG
CGCTTAGCAG ACATCCACTC TCATCTATTT ATCTGTACAG CTATTTTGCA GTTTTATGAA
TATGGCAGCA AATCAGTCGC TGAGCGCTTG CATGCTGAAG TGGCGTTAAA AAATAGCCTT
TATACTATCC AAGAAGCATT CCTATCTTTA TTTGCCAATT TTCCAAATCA GTTTGCAGCC
AAATTAGTGA GCTTTGTGAC TTTTCCCAGT GGTCGTATCT TTGCCCCAGT GAGTGATGAA
TTAAAACGCC AACTGGGTGA TACGTTTATG GATGATTTTG AAGCAAATCC TTTCCGCGAC
TATCTTAAAA CCATGGTTTA TTATAATACT GAGCCGGATG ATGTCACGGG TCGTATGGAG
CATGCTTATC AAATACTGCT CGAAGTCGAA CCCTTATGGC AGAAATTTAA AAAAGCAGAG
CATAAAGACA GTTTTGAAGG TTTAACTTTT GAAGATCATG TAGTCTATGC CAGTCAAAAT
GGCGACATTT CTGAAGAAGA AGCTGAACAG CTAATAACCT ATAATTCGAT ACGCTATGAT
TCCTTATTGA CCGATACATT TGATAAGCAT TTATCAAAAG TGCAAGAACG TGCTAACCCA
CACAGTTTAG AGAACGCTGT ACATAGGCTA ACTGACTATG CTGAACTAAA AAGCGATGCT
CAGTTAAAAA ACAATGCTCA GTTAAATCAG GCATTAAACC CTGATAATCT GCAGCAGACC
TCTGAGAATA TCGCATCAGT TGATTCAATG CCAGACAATA ACCAACCAAC AGGAGATACT
AACCCTGATC ATGGTTACGA AAGTGATGGC GATGTAAAAA TGGTCAATGA ACAAGATACC
GCCAGGGAAA TTAATGCACA GACTGATTTT CAGGATTCAC ATCCTGAAAT AGAAGCCCTT
GGCTCGCGTC ACCGTGATGC AGCATCGCAT CTAAATGAAC GTATGAGTTA TAACCATAGA
TTTAACAAAG ATAAATTTGC TAGCACAAGT CGGGAGCAAG ACAATCACGA GCAGCAAACA
GAAACCAGTG ACCCTACATG GAAAGATGGT TTGCGCCGTG ACGAAAACGA CAATGTCTAA
|
|---|
| Protein sequence | MAIGLFILAV IIQLAMVLAI FLLSLSRVTG SIVALITVLV TAFISPWSLI LGLPIALLCL
VLLITPIRQS LLTKPVYKAL GGAMPSMSDT EREALDAGTS WWEKELFMGA PDWDTFAKYP
YPELSEEEQS FIDNEVEVLC AMLDEWQIHH EDKELSPEAW RFIKANGFLG LIIPKEYGGL
DFSSYAQSRV MSKIASRSPT AAVTCMVPNS LGPGELLMHY GTDEQKQRWL PGLAKGEEVP
CFGLTGPEAG SDAGAIPDTG VVCYGMHEGE QVLGLRMNFS KRWITLAPIA TVVGLAFKMH
DPEGLLGDLE KTDYGITCAL VPASHQGVII GPRHNPIGSP FMNGTVDGQD VFIPLDYIIG
GVENAGRGWR MLMECLGVGR GISLPALSTS ASEMSYLSVG AFAKVREQFK ISVGKFEGVQ
DATSRIASNT YMLEAFRHLV TCGLNQGGTP SVMTAMAKYY ATETMRSVIN DGMDVVGGRA
VQMGPRNFLA IPYQAIPVSI TVEGANILTR SLMIFGQGAM RCHPYLFDEL QLLQSEDKEG
ALKQFDNLFF KHLGYTFNRG AKAFVAGYVG GSNDAPNFAD NFTRPYYKDI NRLSAGFALT
ADMSLGLLAG DLKRKEMLSG RLADIHSHLF ICTAILQFYE YGSKSVAERL HAEVALKNSL
YTIQEAFLSL FANFPNQFAA KLVSFVTFPS GRIFAPVSDE LKRQLGDTFM DDFEANPFRD
YLKTMVYYNT EPDDVTGRME HAYQILLEVE PLWQKFKKAE HKDSFEGLTF EDHVVYASQN
GDISEEEAEQ LITYNSIRYD SLLTDTFDKH LSKVQERANP HSLENAVHRL TDYAELKSDA
QLKNNAQLNQ ALNPDNLQQT SENIASVDSM PDNNQPTGDT NPDHGYESDG DVKMVNEQDT
AREINAQTDF QDSHPEIEAL GSRHRDAASH LNERMSYNHR FNKDKFASTS REQDNHEQQT
ETSDPTWKDG LRRDENDNV
|
|---|
| |