Gene Pcryo_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2104 
Symbol 
ID4035594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2577498 
End bp2579600 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content42% 
IMG OID637974577 
Producthistidine kinase 
Protein accessionYP_581365 
Protein GI93006928 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00890283 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT TGGGTTTTCG TTCCGTATTT GCCAAGCTAT TTGCCAGTGT CATGCTGGCG 
CTTATCTTGT TTGCTGTTGC GATGGTATTA TTAACACAGC TGGTACATGA TAAAGATGCG
GGCATTCGCT CAGAGGTATT GGCCACGCAA ATTTTAGGAC AGATCGATCC TTTTTTGCAT
GAGCTAAATA TCGCAGTTAG TAAGGAAAAT CGCCTACAAT CGCGTTTTAT GCTAGCCGTA
GTCAAAAAAA GCTTCGATAT CTTTGATGAG TCATTGCAGG CAAAAATGGG CTTATATGAC
AGCGAAGGTC ATCTACTGAT GCAAACAGAT AATAGCGATT TGCCGCTAGA GCTTCCTGCT
ACGCCGTCTT TGTTCTCACG CGTTTTCCCC TCTTTTGCAG AAACGTCACC AACCAAGCAA
GCTCAAGTTT ATAGTAGTAC TGGCTATACG CTATTATATG AGTCACGCTT GCCACCCAAA
AAGCCGGTTC TCTCTGCTGC GCTTAACTTA TTTACTGGCA CGCTCTTATT GCTACTCATT
ATGGCAGGCG TCCTTTGGTG GATTGCCCGG ACCATTACTT GGCGTATTAA TCAGATGAGT
CTACAGATGG CTCAGCTTGG CGATGGTGAC TTTACCGTAC GGGTAAATGC ACGCGGCAAT
GATGAAATCG CCTCACTGGC ACGTGGATTT AATCAAGCAG CACAAAAGAT TGAACACCTT
ATTGATGCCA ATAATTTATT ACTTGCACAT GCCTCTCATG AGCTGCGTAC ACCCATAACA
CGTATTCGTC TACAGATTGA GATGATGGAC ATGCTGACAG GTCCATTGCC AAGTGACAAC
AAAGCCAAGT TTGATAAGCG CGCTCAAGCT ATTAATCGCG ACCTCTCAGG TCTCAATGAT
TTGGTTGAAA GTATTCTATT AGTGAGCCGT TTGGATGCCG GTCATGCCTT ACAGCAAGTT
GAAAATTTAG ATTTATATGA TTTGGTGAAT CAAGAACGCC AACACTATCC TGAAGCAACG
TTAATTGGTG AGCACATCGT GATTGACGGT CAATCATCAA TGCTCACCCA TCTAATTCGC
AATCTATTAA CCAATGCCAT GCTGCATGGA AAACCACCAG TCACTGTGCT GCTGTATGGC
GTGCAAACCC TTGAAGAAGC TGAAGATATC CCTGATTTTT TATTGCAGAC AGTATTGTGC
AGTAGTTTTA TAGACTATAA CAGCTCAGAC TTTTATTCTG ATGAGTCATC TTATAGTACA
AATCCGCTTG ATCATCAGCA AGATACCGTA TCAGAGCCGA ATAATTCTAT TAGCGCAGCG
CTTCCAAAGC CAAAAGTAGC AAATAGTGAG TCTGTAGTGA TATTACCAGC ACCAGCTATT
TATCAAAATG GTGAAAATTT GGTGAATGAT GCTAATACTA GTACTGACAA TGAATCTGAT
AATATTGTGA ATCAAGAGAG TGATAGCGCC AATTTAGAGC AAGTAGAGCC TACTAATACG
AGCGAGACAC TTGAAAAGGT TGGTAATTCT TCATTGTTTG ATAATTATCA TAGTTTTACA
TCAGATTTGA CCGATAAGCT AAAGAAAGTG ATGTGGCGTG CTGTGCCTGA GAAGCAATGG
TCTTCTGAAG ATCATGACCA TGCTATTGAT GACATCTCTG GTAAAAATGC TATCAATAGC
GATAAAGAAG ATGCCAATAA AGTGAATAAA AATAGTGATG TTGCGATAAA AGAAAGTGAT
AAAGCAATCG ATAAAGAAAG TCCTGAAACG TCAAATACCA CCCGTAAAGA AAGCCTATTT
AGCAAACATC TCAAAAAATC TAAACCGGAG CCAACACGTC CGCTTCCGAA GTATGTGGTA
TTGGCAGTGA TTGATGAGGG TGATGGCATC CCTGAAAATA AACGTGAAGA AGTTTTTAGC
CCCTTTGTGC GCTTGCAGCA AAAAAATAAA GGCTCAGGTC TTGGCTTGTC CTTAGTATCA
CAAATTGTCA CCGCCCATCA AGGAAGAATC ACTACTGACA CTATCAATGG TCACACGCGA
TTTTTGGTGG TATTACCTGT TAAGCTCGAT CCGCATTACC ACCATCATGA CAATCGTGAC
TGA
 
Protein sequence
MQQLGFRSVF AKLFASVMLA LILFAVAMVL LTQLVHDKDA GIRSEVLATQ ILGQIDPFLH 
ELNIAVSKEN RLQSRFMLAV VKKSFDIFDE SLQAKMGLYD SEGHLLMQTD NSDLPLELPA
TPSLFSRVFP SFAETSPTKQ AQVYSSTGYT LLYESRLPPK KPVLSAALNL FTGTLLLLLI
MAGVLWWIAR TITWRINQMS LQMAQLGDGD FTVRVNARGN DEIASLARGF NQAAQKIEHL
IDANNLLLAH ASHELRTPIT RIRLQIEMMD MLTGPLPSDN KAKFDKRAQA INRDLSGLND
LVESILLVSR LDAGHALQQV ENLDLYDLVN QERQHYPEAT LIGEHIVIDG QSSMLTHLIR
NLLTNAMLHG KPPVTVLLYG VQTLEEAEDI PDFLLQTVLC SSFIDYNSSD FYSDESSYST
NPLDHQQDTV SEPNNSISAA LPKPKVANSE SVVILPAPAI YQNGENLVND ANTSTDNESD
NIVNQESDSA NLEQVEPTNT SETLEKVGNS SLFDNYHSFT SDLTDKLKKV MWRAVPEKQW
SSEDHDHAID DISGKNAINS DKEDANKVNK NSDVAIKESD KAIDKESPET SNTTRKESLF
SKHLKKSKPE PTRPLPKYVV LAVIDEGDGI PENKREEVFS PFVRLQQKNK GSGLGLSLVS
QIVTAHQGRI TTDTINGHTR FLVVLPVKLD PHYHHHDNRD