Gene Pcryo_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2087 
Symbol 
ID4034746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2555178 
End bp2555831 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID637974560 
ProductOmpA/MotB 
Protein accessionYP_581348 
Protein GI93006911 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATA CATTAATGGT TGCAGCAATC GCTTCAGGTT TGGCTCTTAC CGGTTGTGTC 
ACTGATCCTA ACACTGGACA ACAACGTCTT AACAAGTCTG CTATCGGCGC TCTAGCTGGT
GCTGCAGGTG GTGCGACTAT CTCAAAAGCT ACTGGTGGTG ATAAAACTGG TCGTGATGCT
GCTATTGGTG CTGCATTAGG TGCTGGCGTT GGTTACTATA TGGAGCGTCA AGCTCGTCAG
CTTGAGCAAC AAATGGCTGG TACTGGCGTA ACGGTTAAGC CAAACGCTAA CGGCAACATT
GATCTGGTTA TGCCGGGTAG CATCACTTTC TCGTTTGATG ATGCGACTTT GAACAACTCA
TTTAAGCCAA CGCTTGATAA ACTTGCTGCG ACAATGAATG AGTATAACCA AAACACCATT
ACTATTGCTG GTCATACAGA CAGTAAAGGT ACTGATGCTT ATAACATGAA GTTATCACGT
GACCGTGCTT ATGCAGTAGC GAACTACTTA AGTGCGCGTG GCGTAGCATC TAACCGTATC
AATGTTGTTG CTTATGGCGA GTCACGTCCT GTTGCTGATA ACAATAGCGA ATTTGGTCGT
CAACAGAACC GCCGTGTTGA GCTGACAGTT AACGCACCAC AAAGCGTTCG TTAA
 
Protein sequence
MRNTLMVAAI ASGLALTGCV TDPNTGQQRL NKSAIGALAG AAGGATISKA TGGDKTGRDA 
AIGAALGAGV GYYMERQARQ LEQQMAGTGV TVKPNANGNI DLVMPGSITF SFDDATLNNS
FKPTLDKLAA TMNEYNQNTI TIAGHTDSKG TDAYNMKLSR DRAYAVANYL SARGVASNRI
NVVAYGESRP VADNNSEFGR QQNRRVELTV NAPQSVR