Gene Pcryo_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_2021 
Symbol 
ID4034967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2485356 
End bp2485988 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID637974493 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_581282 
Protein GI93006845 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.271206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACAC GTATTGAAAA CAAAAAATTG TCAAAGAGCA GTAGTGCTTG GATGAAAGAG 
CACATTGATG ATCATTATGT GCAAAAGGCC CAAAAAGATG GCTACCGTGC CCGTGCTGCT
TATAAATTAT TAGAAATAAA TGAAAAAACC AATCTGATCA AAAAAGGTAT GACCGTTGTT
GATTTGGGTA GTGCCCCTGG CAGCTGGTCT CAAGTGGCTG GTCACTTGGT TGGTGAAAAA
GGCATCTTGA TTGCCTCTGA TATTTTGCCG ATGGATACCT TGCCGGATGT TACCTTTATC
CAAGGTGACT TTCGCGAGCC AGAAGTGTTT GACCGTATCA TGGCTGAGGT TGGTGACAGA
CAAGTTGATG TGGTGCTGTC TGATATGGCG CCCAATACAG CAGGTAATAG TGCCATTGAT
CAGCCGCGTA TGATGTACTT ATGTGAGCTG GCGGTCGATT TCGCGCTGGC AACCTTACCA
GAAGGTGGCG CGCTTATTAT GAAAGTGTTT CAAGGCGAGG GTACACAAGA ATTACGCAAG
CAGATGCAGG CGGATTTTAG TAAAATCCGT AGTATTAAGC CTGGTGCTTC TAGACCGCGC
TCAAAAGAGA TATTTTGGAT CGCAATTAAG TAA
 
Protein sequence
MATRIENKKL SKSSSAWMKE HIDDHYVQKA QKDGYRARAA YKLLEINEKT NLIKKGMTVV 
DLGSAPGSWS QVAGHLVGEK GILIASDILP MDTLPDVTFI QGDFREPEVF DRIMAEVGDR
QVDVVLSDMA PNTAGNSAID QPRMMYLCEL AVDFALATLP EGGALIMKVF QGEGTQELRK
QMQADFSKIR SIKPGASRPR SKEIFWIAIK