| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2002 |
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| Symbol | ispH |
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| ID | 4034987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2462228 |
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| End bp | 2463184 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637974474 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_581263 |
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| Protein GI | 93006826 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.179252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAATTT ATCTTGCCAA TCCACGTGGA TTTTGTGCTG GTGTGGATCG CGCGATTGCG
ATTGTCAACG AAGCACTGTT ACGTTTTGAG CCACCCATTT ATGTTCGTCA TGAAGTGGTA
CATAACAAGT TTGTGGTATC CGACTTGGCC AATCGCGGTG CTGTTTTTGT GGAAGAGCTA
CATGAAGTGC CAGACGGCTC TATTGTTATT TTTTCCGCTC ACGGGGTTTC AAAAGCTGTA
GAAGATGAAG CAGAACGTCG TGATTTGACG GTGTTTGATG CCACTTGTCC TTTGGTCACT
AAAGTACATA TCGAAGTCGC TAAATTTGCG CAGGATGGTA TGGATGCGGT ATTGATTGGA
CATGCGGGAC ATCCTGAAGT AGAAGGCACT ATGGGACGCT TTAACCATCG TCATGGCGGA
CAGATTCATC TGGTTGAAAA CGAGAGCGAT GTTGAAGCTT TGAGCGTACA AGATGCTGAG
CGCTTAGCAT TTGTGACCCA AACGACCTTA TCGATGGATG ATACCGCGCG CGTTATTGAT
GCGCTACGTG AAAAATTCCC AAGCATTCAA GGTCCACGTA AAGACGATAT CTGTTATGCC
ACCCAAAATC GTCAAGATGC GGTCAAGGAT TTAGCGGGTC GCTGTGAGGT GGTCTTGGTC
GTTGGCTCAC CAAACTCATC AAACTCAAAT CGTTTGCGTG AATTGGCAGA GCGCATGAAT
TGCCGCGCGT ATTTGATTGA TAATGCCACT GAAATGAATA AGAGCTGGTT CGATGGGATA
CAAAGTGTGG GCGTGACTGC AGGTGCTTCA GCGCCTGAAG TATTGATTCA AGAGGTACTA
CAGCAGCTGC AAAATTGGGG TGGTGATTTG CCAAGTGAGC TGTTGGGTAT TGAAGAAAAT
GTCACCTTTA GCTTGCCAAA AGCTTTACGA ATTCCAATGA CGCAAGTTGG CAAATAA
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| Protein sequence | MQIYLANPRG FCAGVDRAIA IVNEALLRFE PPIYVRHEVV HNKFVVSDLA NRGAVFVEEL
HEVPDGSIVI FSAHGVSKAV EDEAERRDLT VFDATCPLVT KVHIEVAKFA QDGMDAVLIG
HAGHPEVEGT MGRFNHRHGG QIHLVENESD VEALSVQDAE RLAFVTQTTL SMDDTARVID
ALREKFPSIQ GPRKDDICYA TQNRQDAVKD LAGRCEVVLV VGSPNSSNSN RLRELAERMN
CRAYLIDNAT EMNKSWFDGI QSVGVTAGAS APEVLIQEVL QQLQNWGGDL PSELLGIEEN
VTFSLPKALR IPMTQVGK
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