Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1959 |
Symbol | |
ID | 4035159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2417454 |
End bp | 2418818 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637974431 |
Product | major facilitator transporter |
Protein accession | YP_581220 |
Protein GI | 93006783 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00498964 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCG TAGAAAAACG GGCAATCCTC GGGGTCGGTG GCATCTTTGC CTTGCGGATG ATTGGTTTGT TTATGATTGT GCCAGTATTT TCTGTGTATG GTGATAATTA TGCGCATGCG ACGCCGTTTC TGATTGGTTT GGCAGTCGGT ATTTATGGGC TAGGACAGGC AATATTTCAG ATTCCAATGA GCCTTGCCGC GGATAAGTTC CCGCGTAAGC CGATTATATT TTTAGGTCTT GTCTTGTTTG CCATCGGCGG TATTATTGCT GCCAATGCCA CAGATATTTA CGAGGTCATT ATTGGTCGAG CACTGGCAGG TAGTGGCGCG GTCTCTGCGG TATTGATGGC GTTACTTGCC GATGTAACTC GTGAGGAGAT GCGCACCAAA GCGATGGCGA CGATGGGTTT GACGATTGCG ACCTCTATCA TGCTTGCTTT TGCCTTTGGG CCTCTATTAG TAGGCTCGCT TGGCATCTCA GGATTGTTTT GGTTGACTGC AGGCTTTGCA GTTTTGGCGA TGTTATTGTT ACTGTTCGTC CCGACACCGC TACGGGTACT TAAGCACAAT TTAGACAATA AATCGATTGG TCAGCAGTTG GCAACAGTTC TAAAAATTGG TGATCTAAAT CGCTTGCACA TTGGCATATT TGCTCTGCAT CTGACCATGA CCGCTATCTT TGTTATTTTA CCGCATCAGC TTAATGACGT ACTAGGATTG TCGGTACGTC AGCAAGGCTT GGTCTATTTG CCTTTATTGT TCATCGGTTT TGCCGTCGCG ATACCTTTTA TTATCATCGC CGAAAAGAAA CGCAAAATGC GCCAAGTATT TTTGGCTGCG ATTGCACTGA TGACGGTTGC CTTAGCATTA TTAGCGCTCG GTGGTCAGGT TGGCGTCGGT ATTATATTAG GCTTATTGCT CTACTTTATG GGCTTTAATC TACTTGAAGC AACGATTCCT TCATGGATAT CTAAGCGCGC ACCAGTCGCC AATAAAGCCA CTGCGATGGG GTTAAATTCA TCCAGTCAGT TCTTTGGTGC TTTCGTTGGT GGCGCAATGG GCGGGTTGTT ATTAAGTCAG CCTAATTTGT TGGCATGGGG CATATTGGCA ATTATAATGG CAGCCTCTTT ATTGCTGATT ATTCCTATTG CTGATCCACC ATATTTGTCA AGTACGACTG TGACGATACC AAAGAATATT GATATTCAGG ACTGGTCACG GCAAATGCTG GCAGTAGATG GTGTTGATGA GCTGGTGGTC ATGGCAAAAG AACAGGTTGC TTATTTAAAA TTGGACAAGA CGCAGCTCAC AGATACTTCG CGACAGGAGC TGTCGCATTT GGCGCAAAGC CCTCTAGATA TTTAA
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Protein sequence | MNSVEKRAIL GVGGIFALRM IGLFMIVPVF SVYGDNYAHA TPFLIGLAVG IYGLGQAIFQ IPMSLAADKF PRKPIIFLGL VLFAIGGIIA ANATDIYEVI IGRALAGSGA VSAVLMALLA DVTREEMRTK AMATMGLTIA TSIMLAFAFG PLLVGSLGIS GLFWLTAGFA VLAMLLLLFV PTPLRVLKHN LDNKSIGQQL ATVLKIGDLN RLHIGIFALH LTMTAIFVIL PHQLNDVLGL SVRQQGLVYL PLLFIGFAVA IPFIIIAEKK RKMRQVFLAA IALMTVALAL LALGGQVGVG IILGLLLYFM GFNLLEATIP SWISKRAPVA NKATAMGLNS SSQFFGAFVG GAMGGLLLSQ PNLLAWGILA IIMAASLLLI IPIADPPYLS STTVTIPKNI DIQDWSRQML AVDGVDELVV MAKEQVAYLK LDKTQLTDTS RQELSHLAQS PLDI
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