Gene Pcryo_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1959 
Symbol 
ID4035159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2417454 
End bp2418818 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content46% 
IMG OID637974431 
Productmajor facilitator transporter 
Protein accessionYP_581220 
Protein GI93006783 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00498964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCG TAGAAAAACG GGCAATCCTC GGGGTCGGTG GCATCTTTGC CTTGCGGATG 
ATTGGTTTGT TTATGATTGT GCCAGTATTT TCTGTGTATG GTGATAATTA TGCGCATGCG
ACGCCGTTTC TGATTGGTTT GGCAGTCGGT ATTTATGGGC TAGGACAGGC AATATTTCAG
ATTCCAATGA GCCTTGCCGC GGATAAGTTC CCGCGTAAGC CGATTATATT TTTAGGTCTT
GTCTTGTTTG CCATCGGCGG TATTATTGCT GCCAATGCCA CAGATATTTA CGAGGTCATT
ATTGGTCGAG CACTGGCAGG TAGTGGCGCG GTCTCTGCGG TATTGATGGC GTTACTTGCC
GATGTAACTC GTGAGGAGAT GCGCACCAAA GCGATGGCGA CGATGGGTTT GACGATTGCG
ACCTCTATCA TGCTTGCTTT TGCCTTTGGG CCTCTATTAG TAGGCTCGCT TGGCATCTCA
GGATTGTTTT GGTTGACTGC AGGCTTTGCA GTTTTGGCGA TGTTATTGTT ACTGTTCGTC
CCGACACCGC TACGGGTACT TAAGCACAAT TTAGACAATA AATCGATTGG TCAGCAGTTG
GCAACAGTTC TAAAAATTGG TGATCTAAAT CGCTTGCACA TTGGCATATT TGCTCTGCAT
CTGACCATGA CCGCTATCTT TGTTATTTTA CCGCATCAGC TTAATGACGT ACTAGGATTG
TCGGTACGTC AGCAAGGCTT GGTCTATTTG CCTTTATTGT TCATCGGTTT TGCCGTCGCG
ATACCTTTTA TTATCATCGC CGAAAAGAAA CGCAAAATGC GCCAAGTATT TTTGGCTGCG
ATTGCACTGA TGACGGTTGC CTTAGCATTA TTAGCGCTCG GTGGTCAGGT TGGCGTCGGT
ATTATATTAG GCTTATTGCT CTACTTTATG GGCTTTAATC TACTTGAAGC AACGATTCCT
TCATGGATAT CTAAGCGCGC ACCAGTCGCC AATAAAGCCA CTGCGATGGG GTTAAATTCA
TCCAGTCAGT TCTTTGGTGC TTTCGTTGGT GGCGCAATGG GCGGGTTGTT ATTAAGTCAG
CCTAATTTGT TGGCATGGGG CATATTGGCA ATTATAATGG CAGCCTCTTT ATTGCTGATT
ATTCCTATTG CTGATCCACC ATATTTGTCA AGTACGACTG TGACGATACC AAAGAATATT
GATATTCAGG ACTGGTCACG GCAAATGCTG GCAGTAGATG GTGTTGATGA GCTGGTGGTC
ATGGCAAAAG AACAGGTTGC TTATTTAAAA TTGGACAAGA CGCAGCTCAC AGATACTTCG
CGACAGGAGC TGTCGCATTT GGCGCAAAGC CCTCTAGATA TTTAA
 
Protein sequence
MNSVEKRAIL GVGGIFALRM IGLFMIVPVF SVYGDNYAHA TPFLIGLAVG IYGLGQAIFQ 
IPMSLAADKF PRKPIIFLGL VLFAIGGIIA ANATDIYEVI IGRALAGSGA VSAVLMALLA
DVTREEMRTK AMATMGLTIA TSIMLAFAFG PLLVGSLGIS GLFWLTAGFA VLAMLLLLFV
PTPLRVLKHN LDNKSIGQQL ATVLKIGDLN RLHIGIFALH LTMTAIFVIL PHQLNDVLGL
SVRQQGLVYL PLLFIGFAVA IPFIIIAEKK RKMRQVFLAA IALMTVALAL LALGGQVGVG
IILGLLLYFM GFNLLEATIP SWISKRAPVA NKATAMGLNS SSQFFGAFVG GAMGGLLLSQ
PNLLAWGILA IIMAASLLLI IPIADPPYLS STTVTIPKNI DIQDWSRQML AVDGVDELVV
MAKEQVAYLK LDKTQLTDTS RQELSHLAQS PLDI