| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1954 |
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| Symbol | |
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| ID | 4035154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2411470 |
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| End bp | 2413722 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637974426 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_581215 |
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| Protein GI | 93006778 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0109975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGTT CTCATAATTT TTCAGTCACA CCTTTGCATC ATATTTTGCA GCGTTTGATG
CGATTGTGCC GTCCTCTTTG CTTGGCCATA CCACTATGGG CGGCTAGTAC TGGGCTGGTG
AGTGCTGAAA GCTGGAAAGT CAATTTGCAA GATGCTGATA TCAAAGCCTT TATCAATGAA
GTGGCGACGA TTACCAATCA AAACTTCGTC CTTGATCCGC GCATCAACGG TAATGTGACT
GTGATCTCCA ACAAGCCTTT GTCGCGTGAT GAGATTTATC AGCTGTTTTT GAGCGTGATG
CAAGTCAACG GTATCGCTGC TATCGATTCA GGTACAACGA TTAAACTGGT GCCAGATAAC
GTCGCCAAAC AAACCGGTGT TGCTGTTGAT TTACGTGGTG AGAGCGTCGG TGAAACCTTG
GCAACGCGGG TGATTTATCT GACGAATACT CAAGCAGCAG AAGTCTTGGG CGTTATCCGT
CCGCTCATGC CACCGTCTGC ACATGCCGCT GCTGTGCCTG GAGTCAATGC CTTAGTGCTG
TCCGATCGTG CTGATAGCCT AAATCAGCTG ACAGCGCTTA TCCGTGATTT AGACAGTAAT
GTGAATGACA GCTTACAAGT CATACCACTA CGTCATGTCG ATGCCGAACG TATGATGGAG
TTGATTAGCG CACTGGTGGC GAGTGCTGGT AGCGGCCAGG CAACTGGCAA CAATCAGCTA
AAGGTTATCG CCGACACGGC GAGCGACAGA CTGTTGGTTA AAGGCAGTCC TGAGATGATT
GCCAAGGTTC AAGAGATGGT CAATCAATTG GACACAACGC CATCAAGGCG CTTAAGTGGT
CTGCGTGTTT TCCGCCTAAA ATATGCCAGT GCCGGTCATA TTGCTGAGAT GCTGCGCGGT
CTCCTTGCCA GCCAATCAAT CAATAGCTCT GGTGGTTCTT CAACATTAGA GTCAGCATCA
TTGAATGATG CCGCTGCTAC AGGGTCGTCG CTAACTGGTG GTGCTAATAG TAAGGTAGGT
AGCAATAGTA TCGGTGGTAC TGCTGCTACG CCTTTACCGA ATAATAGTTC CGCGGGTACA
AGTATCGGTA TCGGTGGTCG ACCTTTTAGT ATTATCGCTG ATGAAACTCA AAACGCCGTC
ATTGTTAATG CAGCACCTGA GCTGATGTTT GAGATCGAAG ACGCTGTCAA TCAGTTAGAC
AGCCGCCGCT CGCAAGTATT GATTCAAGCA GCTATTGTTG AAGTGTCGGG CGATGATGCA
ACGCAGCTTG GGGTTCAGTG GGCGCTAGGT AATGCCAATA GCGGTTATGG CGTGGTGAAC
TTCAATAATG TGGGCGCAAG TGCAGTTTCA CTTGCCGCTG CTGCTTTGTC AGGTGGTACA
GGGATAAGCG CAGCAGCAGG CTCCATTGCT GGTGCTTTGT TAGGTATTGG CAGTAGTAGT
AAAGACAGCA AAGGCAATGC GCAGTTCTAT GGTGCTATCT TGCAAGCGCT TGATTCTTCT
ACCAGCGCCA ATCTGCTATC TATGCCATCG ATTTTGACCT TGGACAATGA AAAAGCCAGT
ATCTTAGTGG GTCAGAACGT GCCGTTTGTG ACAGGCTCCT ACACGACGGG TAGTGACTCT
TCGACGAACC CCTTTCAAAC GATTGATCGC CAAGATATTG GTATCAATCT AAACGTCATC
CCGCATATTG GTGCAAACGG CACCGTACGT TTAGAGGTAT CACAGGAAGT CTCTTCAGTC
GTACCGGGTA GTGCTGGGAA TGCTAGCGGT CTTATCACCA ATAAAAGCCT GATCAATACC
ACCATTTTGG CAGACGATCA GCAGACCATT GCCTTAGGTG GCTTGATGCG CGACAACTCC
ACTACGCGCC AACAAAAAGT GCCAGGTTTG GGTAATGTAC CCCTTATCGG TCGACTGTTC
CGTTCGGACA ATGACAATAG CCAAAAAAGC AATTTAATCA TATTTTTACA GCCGACTATC
CTCCGTGATG GCGGTGCAGT AGCAAGCGTG ACAGAGCGTA AATACAATCA GATGCGCGTT
CTTCAGCTGG TTATCGATAA AAACGGTACG ATTAAACAGC TGCCATTAAG CGGTACCGAA
GGTTGGAATG GTGATATTAT TGCTGATTAT GAGCTTATGC CACTCAATCC TTTGATTCCT
AAACGGGATC AAAAGCCAAA AACAACTTCC AAAGGTTTTA CTCGTGTTGA TAGTCCAAGC
ACAGGTATCA CAACTTATCC CTTAAATCGT TAA
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| Protein sequence | MVSSHNFSVT PLHHILQRLM RLCRPLCLAI PLWAASTGLV SAESWKVNLQ DADIKAFINE
VATITNQNFV LDPRINGNVT VISNKPLSRD EIYQLFLSVM QVNGIAAIDS GTTIKLVPDN
VAKQTGVAVD LRGESVGETL ATRVIYLTNT QAAEVLGVIR PLMPPSAHAA AVPGVNALVL
SDRADSLNQL TALIRDLDSN VNDSLQVIPL RHVDAERMME LISALVASAG SGQATGNNQL
KVIADTASDR LLVKGSPEMI AKVQEMVNQL DTTPSRRLSG LRVFRLKYAS AGHIAEMLRG
LLASQSINSS GGSSTLESAS LNDAAATGSS LTGGANSKVG SNSIGGTAAT PLPNNSSAGT
SIGIGGRPFS IIADETQNAV IVNAAPELMF EIEDAVNQLD SRRSQVLIQA AIVEVSGDDA
TQLGVQWALG NANSGYGVVN FNNVGASAVS LAAAALSGGT GISAAAGSIA GALLGIGSSS
KDSKGNAQFY GAILQALDSS TSANLLSMPS ILTLDNEKAS ILVGQNVPFV TGSYTTGSDS
STNPFQTIDR QDIGINLNVI PHIGANGTVR LEVSQEVSSV VPGSAGNASG LITNKSLINT
TILADDQQTI ALGGLMRDNS TTRQQKVPGL GNVPLIGRLF RSDNDNSQKS NLIIFLQPTI
LRDGGAVASV TERKYNQMRV LQLVIDKNGT IKQLPLSGTE GWNGDIIADY ELMPLNPLIP
KRDQKPKTTS KGFTRVDSPS TGITTYPLNR
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