Gene Pcryo_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1928 
Symbol 
ID4034665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2378626 
End bp2379462 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content48% 
IMG OID637974400 
Productextracellular solute-binding protein 
Protein accessionYP_581189 
Protein GI93006752 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC GCACGCTTTT AGCCCTTGCC GCAAGTACCG TATTGCTTGC CGCTTGTGGT 
CAATCACCTA CCAATGATGC TGAAACCAAG GCAACTGATA CCGCTGCAAG TGGCGGTTCT
GATTTGCTAC AGCGTATCAA TAACGGCGGC ACTATCAACG TCGGTACCGA AGGCACTTAT
CCTCCATTCA CTTATCATGA TGAGAGCGGC AAACTGACCG GCTATGATGT CGAAGTGACG
CGTGCCGTTG CTGACAAACT TGGCGTTAAA GTTGAGTTTC AAGAAACTCA ATGGGATGCA
ATGCTCGCAG GTTTGGACGC CAAGCGTTTT GATATGGTTG CCAACCAAGT CAGCTTGACC
ACGCCTGAGC GTTTAGCAAA ATATGATAAA GCGCAAGCGT ATAGCTGGTC GGGCGCAGTG
GTTTTAGCGC CAAAAGATGA TAACCGTTAT AGCTCGTGGG AGGCTTTAAA AGGTCTGCGT
AGCGCTCAGT CATTGACCAG CAACTATGGT GAGCTTGCAG AGCGTTATCA AGCTGAAGTC
ATCCCTGTTG ATGGTATGGC TCAAGCGATC CAGCTGGTCA AACAAGATCG TGCTGACTTT
ACCATGAATG ACAATCTTGC CATTTTGGAT TATCTAAAAA AATTCCCAGA TGCGGCGCTT
GAGATTAAAT TGACGGCCCC TGTCAGTGAG CAAACCGGTT CGGGATTGGT ATTGATAAAA
GGTGATGATG CGGTATTGGC AAAATTAGAC GAAGCCATGG CAGCATTGGC CGCTGATGGA
ACGCTCACCA AACTGAGCCA AGAATTCTTT GGTGCTGATA TAAGTCAACA AAAATAA
 
Protein sequence
MKRRTLLALA ASTVLLAACG QSPTNDAETK ATDTAASGGS DLLQRINNGG TINVGTEGTY 
PPFTYHDESG KLTGYDVEVT RAVADKLGVK VEFQETQWDA MLAGLDAKRF DMVANQVSLT
TPERLAKYDK AQAYSWSGAV VLAPKDDNRY SSWEALKGLR SAQSLTSNYG ELAERYQAEV
IPVDGMAQAI QLVKQDRADF TMNDNLAILD YLKKFPDAAL EIKLTAPVSE QTGSGLVLIK
GDDAVLAKLD EAMAALAADG TLTKLSQEFF GADISQQK