Gene Pcryo_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1904 
Symbol 
ID4033614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2352468 
End bp2352869 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content44% 
IMG OID637974376 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_581165 
Protein GI93006728 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.358326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.205106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC AATTGGGTGA TGATAGTAGT CAAAGCATGA ATGAGATGAA CCTCATTCCG 
CTGATCGATA TCATGCTGGT ATTAATGATT ATCTTTTTGT TGACGGCGAG CGTATTGAAT
CCGGCAGTGC CATTAGATTT GCCAAAGACC AGTGCGATGT TAAATGAAAT CCCGCCCGAA
GCGATCCAAA TCAGTATTGA TAAAGATGCA GGGATATTTT GGGACAGCGA TCCTATTAGT
ATGGAAGAGC TAGAAGTACG CTTGCAGCAG CAAAGTGCCG CTGGCAAAGA TCCTTCCGTA
CAGCTACGTG CTGATAAAGA CAGTAAATAT GATACCGTCG CTCAAGTGTT GGCAGCGGCG
AGTGAAGCGG GACTAAGCAA AATAGCCTTT GTTAATGAAT AA
 
Protein sequence
MAFQLGDDSS QSMNEMNLIP LIDIMLVLMI IFLLTASVLN PAVPLDLPKT SAMLNEIPPE 
AIQISIDKDA GIFWDSDPIS MEELEVRLQQ QSAAGKDPSV QLRADKDSKY DTVAQVLAAA
SEAGLSKIAF VNE