Gene Pcryo_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1894 
SymbolfumC 
ID4033604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2339756 
End bp2341159 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content46% 
IMG OID637974366 
Productfumarate hydratase 
Protein accessionYP_581155 
Protein GI93006718 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0017878 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAC AGAATCAGGC AACTCGTACC GAAAAAGACA CCATGGGCAA TGTAGAAGTC 
CCAGCTGACG CTTATTGGGG TGCACAAACC CAACGTAGCC GCGAAAACTT TAAAATCGGT
GGCGAGACCT TGCCGCGTCC GATGATTGAA GCGATGGCAC TGGTCAAAAA AGCCGCTGCG
ATTACCAATG CGAGCCTTGA GCGTATCGAA GATGATAAGC GCGATTTAAT CGTACAAGCT
GCTGATGAAG TTATCAACGG TGGTCTAACC GATCAGTTTC CGCTAGTCGT TTGGCAGACC
GGTTCTGGTA CTCAATCAAA CATGAATATG AATGAAGTAT TAGCGAATCG TGCCAATGAA
ATCGCAGGGA ACGCGCGCGG CAGCTATACG CCGATTCACC CAAATGACCA TGTAAATCAT
GCTCAATCTA CCAATGATAG CTTCCCAACG GCGATTCGTG TTGCCGCTGC TCGTGAAATC
AACGGCTTAT TGATTCCAGC GGTAAAAGCC CTGCGTGATA CGCTAGATGC TAAAGCAAAA
GAATTCGATA GCATCGTGAA AATCGGTCGT ACGCATTTAC AAGACGCCAC GCCTTTGACT
TTAGGTCAAG AGTTTAGCGG CTATGTTAGC CAACTTGATC ATTCATTGGT ACGTATTGAT
AATGCGCTAC AAGGCTTGTA TGAATTGCCA TTAGGCGGTA CGGCGGTTGG TACAGGTCTA
AACGCCCATC CTGATTATGC AGTAAAATCA GCTGAGCAAT TGGCGACATT GTCTGGTCTT
CCATTTGTGA CGTCACCGAA TAAATTTGAA GCACTAGCTG CTCGTGATGC CGAAGTATTT
GCGTCAGGCG CATTAAAAAC GCTAGCAAGT AGCTTGAATA AAATCGCTAA CGACGTACGT
TGGTTGGCAT CAGGTCCTCG TTGTGGTTTG GGCGAGTTGA CGATTCCTGA GAATGAGCCA
GGCTCTTCTA TCATGCCGGG CAAAGTAAAC CCAACGCAGT CAGAAGCAAT GACCATGGTT
GTGGCGCAAG TCATGGGTAA CGATGTCACT ATCAGCATGG CAGGCGCGTC AGGTAACTTT
GAGCTAAACG TTTATAAGCC AGTTATCGCG TTTAACTTGT TGCAATCTAT CAAACTGCTT
GGCGATGCGT GCAATAGCTT TAATGAAAAC TGTGCTGTTG GTATCCAGCC AGTAAAAGAC
AAAATCGATG ACTTCTTGCA CAACTCATTG ATGCTAGTGA CTGCGCTTAA CCGTCATGTT
GGTTATGAGA ATGCCGCAAA AATCGCTAAG ACTGCTTATA AAGAAAACAA AACCTTGAAG
CAAGTTGCGG TTGAGTTAGA GCTATTAACT GAAGCACAGT TTGATGAGTG GGTAATTCCT
GCTGATATGG TAAATCCTAG ATAA
 
Protein sequence
MSTQNQATRT EKDTMGNVEV PADAYWGAQT QRSRENFKIG GETLPRPMIE AMALVKKAAA 
ITNASLERIE DDKRDLIVQA ADEVINGGLT DQFPLVVWQT GSGTQSNMNM NEVLANRANE
IAGNARGSYT PIHPNDHVNH AQSTNDSFPT AIRVAAAREI NGLLIPAVKA LRDTLDAKAK
EFDSIVKIGR THLQDATPLT LGQEFSGYVS QLDHSLVRID NALQGLYELP LGGTAVGTGL
NAHPDYAVKS AEQLATLSGL PFVTSPNKFE ALAARDAEVF ASGALKTLAS SLNKIANDVR
WLASGPRCGL GELTIPENEP GSSIMPGKVN PTQSEAMTMV VAQVMGNDVT ISMAGASGNF
ELNVYKPVIA FNLLQSIKLL GDACNSFNEN CAVGIQPVKD KIDDFLHNSL MLVTALNRHV
GYENAAKIAK TAYKENKTLK QVAVELELLT EAQFDEWVIP ADMVNPR