Gene Pcryo_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1877 
Symbol 
ID4034398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2317793 
End bp2318878 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content38% 
IMG OID637974349 
Productporin 
Protein accessionYP_581138 
Protein GI93006701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000050808 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000817359 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAAC TACTTTTAGC TACAGCAATC GCTGCCCTAT CTGTATCTGC AGCCAATGCA 
GCACCAACTG TTTATGGTAA AGCTTTCGTT GCTATGGACT ATGTTAATGC TGAATTTGAT
GGCCCTGCTG GCAACATGTA TGATGAAGAT ACAGTAGAGA TCAACTCTCA TGCTTCACGT
TTAGGCTTTA AAGGTTCTGA AGCTATGACT GCTAACACTG ATGTTATCTA TCAGTTAGAG
TATGGCACAA AGGTTGATGG TGATAAAAAT GGTTTTACTA ACCGTGATAC ATTCCTTGGT
GTAAACAACA AACAATTTGG TGAGTTCCGT GTTGGTAAAA ACCAATCAAC GCTTGCTCGT
ATTGATAACG TTGTTGTTAA CCAAGGTTAT TTTGATAACT TAGGTACTAC TCAAAATGAG
AATGAAGTTG TTGAAGCATT AAACATGGCT GATAGTAACC GTATCGCAAG TTCAATCATC
TGGACTGCAC CTAAGTATAA CGGTCTACCA TTACAATTAT CTGCTATGTA TAGCTCTGAT
GATGTAAATG GTAACGATAA CTCTGGCTTT GGCGTAGCAA TGTTGTTTGA TCAAGGTACT
GGCTTCACTG CTGGTGTTGC TTATGATAAA GATCAAAACA TCCTCGGTGA TATCATCCGT
GGTACTGCTA CTGTAGATCT AAGCAAGTTT ATCGCTGCTC CTGTAACACT AGGCGCGCTA
TATCAAGTAG CTGATTACGA TGGTCTTGAT AGAAATGGCA AGATAACAGG TGCTGAGAAA
GAAAAAGGCT TAGTAATTAG TGCTGAGATG CCTTTAGCTA ACTTTGCTCG CCCAGCGTCT
ATCTATACTC AGTATAACAA AACTGACAAT TTAAATGGTT TTGATAATGC TGATTCAGAT
CAAATCGTTG TTGGTGGCAA ATACATGTAT AAAGACAACA TCATTGCTCA TGCCTATGCT
GGTATGAACA AAGCTGATAA TGTTAACTAT GCATATAAAG CTACTCCAAA TGCTACTTCA
TATACTAATG TACGTGGTGA TGCAGAAGTA TTCGTTATCG GTACTGGTCT AGAATACAAA
TTCTAA
 
Protein sequence
MKKLLLATAI AALSVSAANA APTVYGKAFV AMDYVNAEFD GPAGNMYDED TVEINSHASR 
LGFKGSEAMT ANTDVIYQLE YGTKVDGDKN GFTNRDTFLG VNNKQFGEFR VGKNQSTLAR
IDNVVVNQGY FDNLGTTQNE NEVVEALNMA DSNRIASSII WTAPKYNGLP LQLSAMYSSD
DVNGNDNSGF GVAMLFDQGT GFTAGVAYDK DQNILGDIIR GTATVDLSKF IAAPVTLGAL
YQVADYDGLD RNGKITGAEK EKGLVISAEM PLANFARPAS IYTQYNKTDN LNGFDNADSD
QIVVGGKYMY KDNIIAHAYA GMNKADNVNY AYKATPNATS YTNVRGDAEV FVIGTGLEYK
F