Gene Pcryo_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1868 
Symbol 
ID4034389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2307618 
End bp2308460 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID637974340 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_581129 
Protein GI93006692 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016711 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00380948 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATCAA CCCATGAGTA CTGCATTATG AATACCACTC CTAATATCCA TGCCATGATC 
GTTGCTGCTG GACGCGGTAG TCGCTTTGGC GCGTCTATTG CTAAACAATA TACCTTACTG
CAAGGTCAAA CCTTATTACA GCATAGTGTG GCACGTCTGG CTGAGAGTAA TTATATTGAT
CGATGTCTAT TGGTTGTGGC TCAAGATGAT AGCACTGCCC AGACACTGAG CTTTGCGCTT
CCTATCTATT ATGCTATTGG CGGTACTGAA CGTTGGCAAT CGGTGCAGGC AGGAGTCGAG
GCAATGATTA ATGCGGGCGC AGATGAGTCG GATTTGGTTG TGATCCATGA TGCAGCTCGT
CCTGCAGTGC CAACTCATGA TATTGATGCC GTCATTCAAG CAGCGATGCT AGAGCCTTAT
GGTGCTATTT TAGCGACACC GGTTGCTGAT ACCCTAAAAC AGTCTTACAT AGCATCTAAC
ACACTATCAA CGCCAGCATA TGAAGCTCCA CTATCTCTTC AGCAACTGAA TACTCAGCCG
GAGCTTGCTA ATAGTCAAAG CGGTTATGAC ACGCTTCATA CTTATGCTCA AAAAACTATT
GATCGCAGCC ATATGTGGCA GGCACAAACA CCGCAAGTAT TTAGGCTTGG ACAATTGCAA
CAAGTCTTGA ACTATGTCAC TAAGCATAAT CTGGCCATTA CTGACGAAGC CAGTGCTTTT
GAGCATTTAG AACTGCCAAT TCGATTGGTA ACAGGCAGTC GTCAAAACAT CAAACTGACT
TATCCTGATG ATATTATTTT ACTGACAGCC ATTCTCAAGG CTCAATTCGC CTCTATCTCA
TAA
 
Protein sequence
MESTHEYCIM NTTPNIHAMI VAAGRGSRFG ASIAKQYTLL QGQTLLQHSV ARLAESNYID 
RCLLVVAQDD STAQTLSFAL PIYYAIGGTE RWQSVQAGVE AMINAGADES DLVVIHDAAR
PAVPTHDIDA VIQAAMLEPY GAILATPVAD TLKQSYIASN TLSTPAYEAP LSLQQLNTQP
ELANSQSGYD TLHTYAQKTI DRSHMWQAQT PQVFRLGQLQ QVLNYVTKHN LAITDEASAF
EHLELPIRLV TGSRQNIKLT YPDDIILLTA ILKAQFASIS