Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1850 |
Symbol | |
ID | 4035184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2284468 |
End bp | 2285754 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637974321 |
Product | seryl-tRNA synthetase |
Protein accession | YP_581111 |
Protein GI | 93006674 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.285029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAGACC CAAAACTCTT ACGCGGCGAT TTGACAGATT TACAGCAGCA ATTGGCCACC CGTGGTTATA CGCTTGATAT AGCGTTCTGG CAAAATATTG AGAACGAACG TAAATCGCTA CAAGTAAAGA CCGAAGAGTT GCAGTCGCGC CGTAATACAG GCGCAAAACA AGTTGGCGTG CTTAAAAAAT CTGGCGAAGA TGCTAGTGAG TTGCTTGCTG AGATGCAAAG TGTCAGTGGT GAGATTAAGA CAGCCGAAGA CGAGCTACGT ACCTTACAAG AGCGCATTAG CCAAGCAGCA ATGCAAATTC CAAATATCCC AGCAGCAGAT GTGCCAGTTG GTACATCAGA AGACGATAAC GTCGAAGTAC GCAAATGGGG CACACCGCGT GAGTTTGATT TTGAGATTAA AGATCATACG CATATTGGTG AGACACTTGG TATGCTCGAT TTTGAAGCAG CAACCAAGCT TACAGGAAGT CGCTTTAACG TCTTAAAAGG ACAATTGGCG CAGATGCATC GTGCGTTGAT TCAGTTTATG CTCAATACCC ATACGATCAA GTATGGCTAT ACTGAAACTT ATGTACCGTA TATTGTTAAT TCTGAAAGTT TAAAAGGTAC AGGTCAGCTG CCTAAGTTTG AAGATGATTT GTTTAAATTG ACCAATCATA CCAATAATGA TGACATGGAT TTTTATCTCA TTCCAACCGC TGAAGTGCCA ATGACCAACT TGGTACGCGG CGAGCGCTTA GATATCAAAG AGCTACCGTT GAAATTTACC GCGCATACGC CGTGTTTCCG TAGTGAAGCT GGCTCGCATG GTCGTGATAC CCGTGGTCTG ATTCGTCAGC ATCAGTTTGA AAAAGTTGAG ATGGTTAATA TTGCCACAGC TGAGCAGTCA GATGAGTTGC TTGAAGCGAT GACTGGACAA GCAGAATTTA TTTTACAGCA GCTTAATTTG CCATACCGCA CCGTCAAATT GTGCACCGGC GATATGGGTT TTGCCGCCCA AAAAACTTAT GATATCGAAG TCTGGTTACC AAGCCAAGAG ACCTATCGTG AAATCTCAAG CTGCTCAAAC TGCGGCGATT TCCAAGCACG CCGTATGGGT ACACGTGTTA AGGACGGCAA ACAAACCAGT TTAGCTCATA CCTTAAACGG TTCGGGTTTA GCAGTAGGTC GTACATTATT GGCAGTGATG GAAAACCATC AAAACGCTGA TGGTAGTATT ACGATTCCAG AAGTATTGCG TCCGTTTATG GGTGGTGCTG ACATCATTTT ATTATAG
|
Protein sequence | MIDPKLLRGD LTDLQQQLAT RGYTLDIAFW QNIENERKSL QVKTEELQSR RNTGAKQVGV LKKSGEDASE LLAEMQSVSG EIKTAEDELR TLQERISQAA MQIPNIPAAD VPVGTSEDDN VEVRKWGTPR EFDFEIKDHT HIGETLGMLD FEAATKLTGS RFNVLKGQLA QMHRALIQFM LNTHTIKYGY TETYVPYIVN SESLKGTGQL PKFEDDLFKL TNHTNNDDMD FYLIPTAEVP MTNLVRGERL DIKELPLKFT AHTPCFRSEA GSHGRDTRGL IRQHQFEKVE MVNIATAEQS DELLEAMTGQ AEFILQQLNL PYRTVKLCTG DMGFAAQKTY DIEVWLPSQE TYREISSCSN CGDFQARRMG TRVKDGKQTS LAHTLNGSGL AVGRTLLAVM ENHQNADGSI TIPEVLRPFM GGADIILL
|
| |