Gene Pcryo_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1738 
Symbol 
ID4035239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2152476 
End bp2152928 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content44% 
IMG OID637974206 
Productpreprotein translocase subunit SecB 
Protein accessionYP_580999 
Protein GI93006562 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00191697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AACAAGCTCA ACCGCAATTA GCACTAGAAC GTATTTATGT CAAAGACATG 
TCACTTGAAG TCCCAGGCGC TGGCGTATTC ACCAAAGAGT GGAACCCTGA GCTTGATATT
AATCTCTCTA GCAATGCCGA AAAACTGGAC GATGACCATT ATCAGGTTGT ATTAACCGTT
AGTGTCACTG CGAAAAATGC TGAAGAAGCG GCGTTTATCG CGGAAGTTCA TCAAGCAGGT
ATCTTCTTAT TAAAAGACAT CCCAGAAGAT CAAATTGGTC AAATCCTAGG TGCTTATTGC
CCGAACGTTT TGTTCCCATA TGCTCGTGAA GTCATCAGCG ATATCGTAAC GCGTGGTAGC
TTCCCGCAGT TATTGCTTGC GCCAGTTAAC TTTGACCAAG CTTTTGCGCA AAGTCAGCAG
CAAGCACAAG TTGATGCTGA AGGTAACGCT TAA
 
Protein sequence
MAEEQAQPQL ALERIYVKDM SLEVPGAGVF TKEWNPELDI NLSSNAEKLD DDHYQVVLTV 
SVTAKNAEEA AFIAEVHQAG IFLLKDIPED QIGQILGAYC PNVLFPYARE VISDIVTRGS
FPQLLLAPVN FDQAFAQSQQ QAQVDAEGNA