Gene Pcryo_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1655 
Symbol 
ID4034766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2039623 
End bp2040135 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID637974120 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_580916 
Protein GI93006479 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00267813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000498182 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTTTAA CTACTCGAGG CAGATATGCC GTGACCGCTT TGCTAGATTT GGCATTACAA 
ACCAGCCAAC AAGAAAGCGC GGTGTCTTTA TCCGATATTG CCAAGCGACA ATCCATTTCT
ATATCCTACC TCGAGCAGTT ATTCTCAAAA CTTCGTAAGC GTGGTTTGGT CACTAGTATT
CGCGGCGCAG CAGGTGGCTA TTATTTAGCA AAGCCACTTG ATCAGATTGA TGTGATGAGT
ATCATCTCTG CTGTCGATGA ATCGGTCAAT GCCATGCAGT GTGAAGGACG CGGCGACTGC
CAAGGTGGTA CAATGTGTCT GACCCATGAT TTGTGGTGTG CATTATCAAA TCATGTAGAG
CAGTACTTGA AAAATATAAC ATTAGCGCAA TTATTAAACA TGGAGCACGT GCAGTCTGTA
TCAGATCGGC AGCACAGCGA TGCTCTAAAA GATATTTCTA TAAAAGACAT TAACACTATT
ACTTTATCGA CCAGCGAGGC AAACCCAGCA TGA
 
Protein sequence
MRLTTRGRYA VTALLDLALQ TSQQESAVSL SDIAKRQSIS ISYLEQLFSK LRKRGLVTSI 
RGAAGGYYLA KPLDQIDVMS IISAVDESVN AMQCEGRGDC QGGTMCLTHD LWCALSNHVE
QYLKNITLAQ LLNMEHVQSV SDRQHSDALK DISIKDINTI TLSTSEANPA