Gene Pcryo_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1646 
Symbol 
ID4035588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2027215 
End bp2029698 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content45% 
IMG OID637974111 
Productpenicillin-binding protein 1B 
Protein accessionYP_580907 
Protein GI93006470 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00102238 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAAAAAT CTAATTCTAA GCAACCACAG TCCTCTAAGC CTGCTATCAA TACGCTACCT 
TCCCAGCAGC GCGGTGTGGT GTTTAGTAGT ATTTTATTAA TTGTTGTCAT CGCTGGCATG
GTGCTATTAG CACTATACTT GGTCAAACTT GATCGCACCA TTACTCACAA GTTTGAGGGT
AAACGCTGGG ATATTCCTGC CAAAGTATAT TCGCAGCCAT TAGAGCTGTA TCAAGGGGCC
AACGTCGATA AAGACACGAT GAAGAAATGG CTTGAGCTAC TTAATTATCA AAGTGATAAA
GCCTATGATC GCACGGGTAC TTATCATAAA TCGGGTAATA CCTATTTTAT TCATACACGT
GGGTTTACTT ATAGCGCTAA TGATATAGAT CAAGAGCAAG TCATCAAAAT GACTATTGCT
GGTGATAAGA TTGAGTCAGT ACAAAGTACT GTGGCGGCGA AAACCGGCAT TATCCGTCTT
GAACCGGTGA ATATCGGTGG TATTTACCCA GATAGTAACG AAGACCGTAT GGTTGTCTCG
TTAGATCAAG TACCCCAGCC GCTTATTGAT GCGCTGATAG CGACAGAAGA TCGTGGTTTT
TATGAACATA AAGGGGTATC GATACGTGGT ATCGCTCGTG CAGTTATCAA TAACTTCTCT
GGTGGATCAC GTCAAGGTGG CTCGACCATC ACCCAGCAGC TGATCAAAAA CTTTTATCTG
AATTCAGACC GCACAATGAA GCGTAAAGCC AATGAAGCCT TGATGGCTGT GCTACTTGAG
CTGCATTATA GTAAAGATGA GATTTTGCAA GCATATCTCA ACGAGATTTA TCTTGGTCAA
AATGGCAAAC GCTCTATTAA TGGTTTTGGG TTGGCATCAC AATTTTATTT TGATAAGCCT
CTCAATGAGC TGCGCCTAGA TCAGCAAGCA TTGCTTGTCG GTATGGCAAA AGGACCGAGC
GTTTATAATC CGCGCCGTCA TCCAAACGAT TCAAAGGCGC GTCGCGATGT TGTGCTTAGC
AATATGTTGG CCGTCGGCTC GCTCAGTCAA GAAGACTACG ATAAAGCATT AAAAAACTCA
CTTGGGGTAG TTGATAAGCC TGTTGAAGGT AAAAGCCAAT TCCCTGACTT TTTAGATATC
GTCAAGCGTG AACTAAATAA AGTCTATTAT TCCGATGATC TCAAAAATGA AGGTCTGATT
ATCATCAGTA CGATGGACCC TATTGCCCAG TTGGCAGCGG ACAAAGCGGT TGAGAGAAAG
CTTGGCGAGC TACGCCGTAG TGGTAGCAAA ACCAAAGATT TACAAGGGGC ACTGGTCAGT
GCCAATCCTG AGACGGGTGA GCTGGTTTCT GTTGTCGGTA GCGGCAGCGA GTTTACTGGC
TTTAACCGTG CGGTCGATGC CAAACGCCAA GTAGGCTCAT TATTAAAGCC GATTATTTAT
ATGACTGCTC TCGAAAGTGG TCGCTATAAT TTGGCAAGTT CGGTTGATGA CTCCCCTATT
ACGGTCAGTC TAAGCGACGG TACCGAATGG AATCCCAAAA ACTATGACAA TCGTGATCAT
GGCTACATAC CCTTTACCAC AGCGCTGTCG CAATCGTATA ACCATAGTGC CGTACGCTTA
GGGATGGAGT TTGGAGTCGA CACCTTTGCC AAGCAATTAA AACGTATGGG CGTTAAAGAG
AAAATACCTC CTTATCCTGC GGCATTATTG GGCTCAGTCA ATCTAAGCCC GATGGACATG
CTTGGGGTCT ATCAAGTTTT TGCAACGGGT GGTTTCCGTA CGCCTATTCA TAGTATCCGT
AGTGTGATTG ATGATCGCGG TAGTATTTTG CAGCGCACAG GCTTAAATAC TCAGCGCAGT
ATTCCGCCTG AGACCAACTT TTTGATTAAT TATGCGTTGC AAGATGTCGT CAAGAACGGT
ACAGCTAGAC GCGTGCAATC GCTTGGTAGC AATCTAAATC TTGCGGGCAA AACAGGTACT
ACCAATGATT ACCGCGATGC GTGGTTTGCC GGTTATAGTG GCAACTATGT CAGCGTGGTT
TGGGTTGGAC GTGATGATAA TAAACCGATT GGGCTTAGTG GCGGTAGCGG TGCTTTGCCA
GTTTGGGTTG ATTATATGAA TCGTCTAAAA CTGACACCTG TTGCGCTACC AGAGCCAGAA
GGCATCGAAT GGCTCTGGTT AGAGAACAAC TCAGGCAAGC TGTCTAATGA GCGCTGTGCC
AGCGCACGCT ACTTGCCTGT TATGTCAGCA TATTTGCCCC AAGAAGCCAG CAGCTGTGCG
ATTGGCTTAT ACCAACAGGA TCGTGCGCGC GAGCAAATGC AGTGGCAAAA TCAGCAAGGC
GATATCAATA AGCAACGTCG CCGTGAAGGA TTAGACATAC CAGATGGTGA AGTTATTGAT
AATAATAGCA ATGATGCCGA GCAAGACGGT GATACACCCA ATCGTGTAGA TACTTGGTAT
GATCGTGCTG TTGAATGGTT TTAG
 
Protein sequence
MQKSNSKQPQ SSKPAINTLP SQQRGVVFSS ILLIVVIAGM VLLALYLVKL DRTITHKFEG 
KRWDIPAKVY SQPLELYQGA NVDKDTMKKW LELLNYQSDK AYDRTGTYHK SGNTYFIHTR
GFTYSANDID QEQVIKMTIA GDKIESVQST VAAKTGIIRL EPVNIGGIYP DSNEDRMVVS
LDQVPQPLID ALIATEDRGF YEHKGVSIRG IARAVINNFS GGSRQGGSTI TQQLIKNFYL
NSDRTMKRKA NEALMAVLLE LHYSKDEILQ AYLNEIYLGQ NGKRSINGFG LASQFYFDKP
LNELRLDQQA LLVGMAKGPS VYNPRRHPND SKARRDVVLS NMLAVGSLSQ EDYDKALKNS
LGVVDKPVEG KSQFPDFLDI VKRELNKVYY SDDLKNEGLI IISTMDPIAQ LAADKAVERK
LGELRRSGSK TKDLQGALVS ANPETGELVS VVGSGSEFTG FNRAVDAKRQ VGSLLKPIIY
MTALESGRYN LASSVDDSPI TVSLSDGTEW NPKNYDNRDH GYIPFTTALS QSYNHSAVRL
GMEFGVDTFA KQLKRMGVKE KIPPYPAALL GSVNLSPMDM LGVYQVFATG GFRTPIHSIR
SVIDDRGSIL QRTGLNTQRS IPPETNFLIN YALQDVVKNG TARRVQSLGS NLNLAGKTGT
TNDYRDAWFA GYSGNYVSVV WVGRDDNKPI GLSGGSGALP VWVDYMNRLK LTPVALPEPE
GIEWLWLENN SGKLSNERCA SARYLPVMSA YLPQEASSCA IGLYQQDRAR EQMQWQNQQG
DINKQRRREG LDIPDGEVID NNSNDAEQDG DTPNRVDTWY DRAVEWF