Gene Pcryo_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1582 
Symbol 
ID4035345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1940267 
End bp1942213 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content45% 
IMG OID637974045 
ProductABC transporter related 
Protein accessionYP_580843 
Protein GI93006406 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0018197 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA TACATTTAAA AGATATTCAC TTAGCCTTTG GCGTCGCTCC TGTCCTTGAT 
GGTATTGACT TTGCTATCGA TTCAGGCGAG CGCGTGTGCT TAATTGGTCG CAATGGCGAA
GGCAAATCCA CCTTATTTAA ACTGATTAAT GGCACATTGT TGCCTGATAG CGGCGAAGTT
ATTATTAATA ATAGTGTACG CGTCGCTATG CTCGAGCAGG ATGTACCTGA AACCAGCGGT
AGAATTTTAG ATATCGTTAT GGGTGGCAGC AAACGCACTG CCGAGCTGCT GATTAACTAT
AATGCGCAAA CTGATTTGTG TGCCAATGGT GACATGGATG CCTGCGAGCG TATGGCAGAC
TTGCAGCATG ATATCGATGC GGTACATGGT TGGGATTTAG AGCGCGAAGC AACACGTCTT
ATCACGACAA TGGGTCTCGA TCCAGACGAT GACTTATCGT CACTATCTGG TGGTCGTAAG
CGCCGTGTTT TATTAGCACG CTCGTTAGTG ACTAAACCTG ACGTATTGCT TCTCGATGAA
CCGACCAACC ATTTGGACGT TGATAGCATT GAGTGGCTTG AGCGCTTTTT ATTAGATTGG
CAAGGTCTGA CATTATTGTT CGTTACCCAT GATAGAGCAT TCGTGAATAA ATTATCGACT
CGTATCATTG AGCTTGATCG CGGTCAATTG ACCAGCTATG ACGTCACTCA AGGTGAAGGT
GGCTATGCAC GCTACCAAGA ATTAAAAGAG CTACAGTTAC TAGCTGAAGA GAAGAATAAT
GCCAACTTTG ATAAAAAATT GGCACAAGAA GAAGTTTGGA TTCGCCAAGG TATCAAAGCA
CGCCGTACCC GTAACGAAGG TCGTGTGCGT GAGCTAAAAG CGTTGCGTGA AGAGCGTAGC
GACCGCCGTG AGCAAGTCGG TAATGTCAAT ATTACCATGG GTCAAGGCGA GAAAAGCGGC
AAGCTGGTCT GCAAGGTTAA AAACCTACAT CTACAATATG ATGATCATGT ATTGGTCGAT
AACTTTAGCA CTACCATCAT GCGCGGTGAC AAAATCGGTA TCGTCGGTCC GAATGGTGCA
GGTAAAACCA CGCTTATTAA AGCCCTACTC GATATGTCAG ACGATGATGT GATCAAAACA
GGCAGCGTTG AATTAGGTAC TAACTTAAAA ATTGCTTTCT TTGACCAGCT GCGTGATCAG
TTAGATTTGG AAGCCAGTGT GGCGCAAAAC GTCTCAGAAG GCTCTGACTT CGTCGAAGTC
GGCGGTCGTA AAACGCACAT TATGAGCTAT CTACAAGATT TCTTATTTGC GCCAGAGCGT
GCCCGTACGC CCGTCAAAGC ATTATCAGGT GGTGAGCGTA ACCGCGTGCT ACTAGCTAAG
CAATTATTAA AACCTGCAAA TATCCTCGTA CTCGATGAGC CAACCAACGA CTTGGATATG
GCGACACTTG AGCTACTAGA AGAATCCGTC GCCAGCTTTG GTGGTACGAT TTTGCTCATT
AGCCATGATC GCTCATTTAT GGACAATGTC GTCACTTCCA CTTGGGTATT TGATACTGAT
GAAGATGGTA AAGGCACCGT CAGCGAGTAT GTCGGCGGCT ATCAAGAGTA TTTGGTACAA
AAAAACCGCG AAGAAGCTTC TAAAGCAGCT AAATCTTCTA GTAGTAATAC TACTGCCAAC
AGCAAATCTG TTAATAAATC AGCGGCAGTA GCGAAACCTA ATACTGCTGC TAAAAAGCTT
AATTTCAATG ACCAGCGTGA GCTTGATGCG TTACCAAAAG AGATCGCTGC TTTAGAAGCG
GAACAAACGC AGCTAGAAGA AAAGCTAGCC GACGGTACTT GGTTTAATCA AGATTTTGAT
GCGGCAACAG CTGCTAGTGA GCGACTGCTT GCCATTGAAG ATGAGATGAT GATTAAGCTT
GAACGCTGGA ATACGCTTGA GAGCTAA
 
Protein sequence
MALIHLKDIH LAFGVAPVLD GIDFAIDSGE RVCLIGRNGE GKSTLFKLIN GTLLPDSGEV 
IINNSVRVAM LEQDVPETSG RILDIVMGGS KRTAELLINY NAQTDLCANG DMDACERMAD
LQHDIDAVHG WDLEREATRL ITTMGLDPDD DLSSLSGGRK RRVLLARSLV TKPDVLLLDE
PTNHLDVDSI EWLERFLLDW QGLTLLFVTH DRAFVNKLST RIIELDRGQL TSYDVTQGEG
GYARYQELKE LQLLAEEKNN ANFDKKLAQE EVWIRQGIKA RRTRNEGRVR ELKALREERS
DRREQVGNVN ITMGQGEKSG KLVCKVKNLH LQYDDHVLVD NFSTTIMRGD KIGIVGPNGA
GKTTLIKALL DMSDDDVIKT GSVELGTNLK IAFFDQLRDQ LDLEASVAQN VSEGSDFVEV
GGRKTHIMSY LQDFLFAPER ARTPVKALSG GERNRVLLAK QLLKPANILV LDEPTNDLDM
ATLELLEESV ASFGGTILLI SHDRSFMDNV VTSTWVFDTD EDGKGTVSEY VGGYQEYLVQ
KNREEASKAA KSSSSNTTAN SKSVNKSAAV AKPNTAAKKL NFNDQRELDA LPKEIAALEA
EQTQLEEKLA DGTWFNQDFD AATAASERLL AIEDEMMIKL ERWNTLES