Gene Pcryo_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1476 
Symbol 
ID4035122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1816087 
End bp1816623 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID637973940 
Product3-dehydroquinate dehydratase 
Protein accessionYP_580739 
Protein GI93006302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.657033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT CATCTCAATC AGCAACGACC AGCACTGCTT CCCATAAAAA AGCCAATAAA 
ACCCTTACTC ATAAGCTATT ATTGATTAAT GGTGTCAATC TAAATCTACT CGGCAAACGT
GAGCCTGATA TTTATGGTCA TATGACGCTT GCTGATATTG AGAGTGCTTT AATCAAGCGC
GCCGCGGCAC ATGGTATTGA GCTAATTTGT AGTCAGTCGA ATCACGAAGG CAAACTGGTC
GATGATATTC AGTATTACGG TCTATTGGCA GAGCCAAGCG CACAGATCGA TGCCATAATC
ATCAATCCTG CTGCTTTTAC TCATACGTCT GTTGCGATAC GCGATGCGCT ACTTGCTACC
CAAAAGCCAT TTATAGAAGT GCATCTATCG AACGTCCACG CACGTGAATC GTTTCGCGAG
CATTCTTATT TATGTGATGT AGCAGTTGGC GTGATTTGTG GTTTGGGGCA TTTGGGCTAT
GATATGGCAT TGGATTATTG GCTGACCCAT ACTTATGCAA TAACACTGAA TAAGTAG
 
Protein sequence
MTASSQSATT STASHKKANK TLTHKLLLIN GVNLNLLGKR EPDIYGHMTL ADIESALIKR 
AAAHGIELIC SQSNHEGKLV DDIQYYGLLA EPSAQIDAII INPAAFTHTS VAIRDALLAT
QKPFIEVHLS NVHARESFRE HSYLCDVAVG VICGLGHLGY DMALDYWLTH TYAITLNK