Gene Pcryo_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1427 
Symbol 
ID4035206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1753471 
End bp1754721 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content44% 
IMG OID637973891 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_580690 
Protein GI93006253 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.208524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.512662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC GATTATTAGT GAATTATAAA TTACCAGCTA AAGTCGTGGG TATGGCGATA 
GTAGCGAGCA GTGTCTTTTA TGTCGGTTGC GCCTCCACTG AAAAACCGCC TACCATAAAA
GATGTTTCCA TTGACAATCC TTATGCGCCT ACTGACCCTA ATTTAGCAGT AGCGACGGTC
GCTGGTGGCT GCTTTTGGTG TGTCGAGGCG GGTTATGAAA AGATTCCTGG TGTGGTAGAG
GTGGTGTCAG GTTATACAGG TGGCGAATCT AAAAACCCAA CTTATAAACA AGTATCAGCA
GGTGGTACGG GTCATACGGA AGCGGCTCAA GTTTATTATG ATCCGACCAA GATTACCTAC
AATGGTATCG TTCAAGCACT ATGGCGAATC GCTGATCCTA CTGATGATAA AGGTCAGTTT
GTAGATAGAG GCACCCAGTA TCGCCCAGCT ATTTTTTATA ATAGTGAGCA AGAAAAACAG
ATAGCCGAAG CTGCCAAGCA ATCGCTGCAA GCCTCTGGCG TCTATAAAAA GCCAGTCGTA
ATCGAGATTG TGCCTGTTAG CGAATTTTAT CCAGCAGAAG AGTATCATCA GGATTATTAC
AAAAAGAATC CACTACGTTA TAAGGCCTAT ACGTTTAACT CTGGTCGCTA CCAGTTCATT
GAAAGTGTCT ATGGCAAAAA ATATGAGTTA GATTTCAACC AATTCAAACC GACTGTAACC
AGTGCAAAGT CAGCAATGTC GAATACCTCG TCAGCTGCAG TAAAGCCGTC GACAGTTAAG
ACAAGTGCAG GCTTTGACCC AGATACCTTT GTAAAACCGA CAAAAGCTGA TCTTAAAAAA
TCACTAAGTG ACATTCAATA TAAAGTCTCT CAGGAAGATA GTACTGAGCG CGCTTTTGAT
AACGAATATT GGGATAATAA AGAACCTGGA CTGTATGTCG ATGTAGTATC AGGTGAACCA
TTATATTCGT CTCGTGATCA ATACAAGTCC GGTACAGGTT GGCCGAGCTT TACTCGTCCA
CTGAATGCTA GCTTTGTCGT AGAAAAGGCA GATCGAGGAA TATTTGGCAC CCGTACCGAG
ATTCGTAGCC GTTATGCAGA TTCACACGTC GGTCATGTAT TTGACGATGG TCCGGCACCG
ACGGGTAAGC GCTATTGCAT GAACTCAGCA GCAATGCGTT TTATCCCACT GGCGCAGATG
GAAGCGGCTG GCTATGGTAG ATGGATCAAT GACGTAAAAT CAGCTAGCTA A
 
Protein sequence
MTHRLLVNYK LPAKVVGMAI VASSVFYVGC ASTEKPPTIK DVSIDNPYAP TDPNLAVATV 
AGGCFWCVEA GYEKIPGVVE VVSGYTGGES KNPTYKQVSA GGTGHTEAAQ VYYDPTKITY
NGIVQALWRI ADPTDDKGQF VDRGTQYRPA IFYNSEQEKQ IAEAAKQSLQ ASGVYKKPVV
IEIVPVSEFY PAEEYHQDYY KKNPLRYKAY TFNSGRYQFI ESVYGKKYEL DFNQFKPTVT
SAKSAMSNTS SAAVKPSTVK TSAGFDPDTF VKPTKADLKK SLSDIQYKVS QEDSTERAFD
NEYWDNKEPG LYVDVVSGEP LYSSRDQYKS GTGWPSFTRP LNASFVVEKA DRGIFGTRTE
IRSRYADSHV GHVFDDGPAP TGKRYCMNSA AMRFIPLAQM EAAGYGRWIN DVKSAS