Gene Pcryo_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1407 
Symbol 
ID4035802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1727235 
End bp1729292 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content46% 
IMG OID637973871 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_580670 
Protein GI93006233 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.95549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.915026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC AATATCAAGT TTTAGCCCGC AAATACCGCC CCAAAAACTT TCACGAGTTG 
ATTGGGCAAA CGCATGTCTC ACAGGCGTTG ATCAATGCGA TTGATTACAA TCGTCTGCAT
CATGCTTATT TATTTACGGG TACGCGCGGT GTCGGTAAAA CGACCATCGC CCGTATTTTG
TCTAAATGTT TGAACTGTGA TACTGGCATT ACCAGTACCC CATGTGGCGT GTGTGATAAT
TGCGTGGCGA TTGATCAAGG GCGTTTTATT GATCTGATTG AGATTGATGC GGCTTCTCGT
ACCAAAGTTG AGGACACGCG CGAGCTACTG GATAATGTGC CGTATGCGCC AAGCCAAGGC
CGTTATAAAG TCTACCTGAT TGACGAAGTG CATATGCTGT CGACACACAG TTTTAACGCG
CTTCTTAAGA CTTTGGAAGA GCCTCCTGAG CATGTCAAGT TCCTATTAGC CACTACGGAT
CCACAAAAGC TGCCGATTAC TATTATCTCG CGCTGTCTGC AGTTCGTATT ACGTCCTTTG
TCGCAAAGCT TGCTCAGTGA GCATTTAGCC AATGTTCTAA CTCAAGAACA AGTAGGCTAT
ACACAGCCTG CACTTTGGCA ATTGGCTAGT GCGGCAAAAG GCTCGGTACG TGATGCTTTA
TCCTTGACCG ATCAAGCCAT TGCTTTTGGC CAAGGTGCGC TTGATGATGT GACCGTTAAT
TCGATGCTCG GCTTGATTGA TGCGGCCGAC TTAGTGAGCT TAATTACAGA TATCTATAAT
CATGATAAGC CTGCTGTCGC TGCCCATATC GAGCAGATGC GTGCGCAAAT GGTTGATGCT
AGCAGTATGT TTGACGGACT CGCTGAGCTA TTGCATCAGT TGGCATTGTG TCAGCTGCTG
CCCGAAGTCG CTCTCAATGT CAATGAAGCG CAAGCACAGC ATATCGATCA GCTTGCCCAG
CATATGAGCC CTGACGTATT ACAGCTTTAT TATGAAATTG TGGTACAAGC ACGGGAAGGC
GTCAAGCTTG CCAGTACGCC GATGCAAGCA CTTGAGATGT GTATTTTACG TCTCTTAGCT
TTTCGTCCCT TACCGGTTGA TGAGATATTA GCCAATGTAC TTGATAGTAC GGTAATGGCT
ATAGAAAAAC CTACTACCAC TGTCTCTAGC GCTACATTAA TCACTGAGCC AGTGTCATCA
TCATTAGAAT TACAAACTCA ATCTGATAAT ATCGTTTATG AGAATATTGA TACAAGTGTC
AATGATAAAC AGGATGTTGG TGCTGATAAT AGTATTACTC AACATGAGCA ATATTACTCA
AATGACGAGG CTAGTCATTT AAACCAGTAC GACAATTCTA GCGTTTATGA CACGCTAGAA
TTGTCCAATA ATCAGCCTGA ACCCGTTGTT GAACCCGTTG TTGAACCCGT TGTTGAACCC
GTTGTTGAAC CCGTTGTTGA ACCCGTTGTT GAACCCGTTG TTGAACCCGT TGTTGAACCC
GTTGTTGAAC CCGTTGTTGA ACCCGTTGTT GAACCCGTTG TTGAACCCGT TGTTGAACCC
GTTGTTGAAC CCGTTGTTGA ACCCGAGGTA AATGATTCTC AATTATTAAT TCAATCTGAA
GACCCTCGGG CGCTTCTACG TTGTCCGCCG CAAGAATTGA TAGGTGAGTG GACACCAGAA
AAATGGGACT ATTGGCTACA AACTGCTCGT GAAGCCGCTA GTTTGGCTCA AGATGAATTG
GCGCTTGCCC GTCAAGGTAT GATGACAGGC AGCTGTAATG CCGAAGCCAT CTTTGTCACA
GCAGTCGATA GTAAGCATTT GCAGGCAACC TTTGAGCAGC TAGCGACAAA GATGCAGGTA
CAATTCCCTG ATGCTGCCAT CAGCTTACGA ATTGATAGCA GTATCGCGCA AGCCGATGAT
AAAACCCCAG AGCGTCGTCA ACAAAAACGT CTCGTTGAGG CTAAAACAGT GGCAGAATCA
AGATTGTTTA ATACGCCAGT GATGCAATAT TTAACCGAGC GCGGCGAAGG AAAAATGGGC
AAGGTTCAGT TATATTAA
 
Protein sequence
MTQQYQVLAR KYRPKNFHEL IGQTHVSQAL INAIDYNRLH HAYLFTGTRG VGKTTIARIL 
SKCLNCDTGI TSTPCGVCDN CVAIDQGRFI DLIEIDAASR TKVEDTRELL DNVPYAPSQG
RYKVYLIDEV HMLSTHSFNA LLKTLEEPPE HVKFLLATTD PQKLPITIIS RCLQFVLRPL
SQSLLSEHLA NVLTQEQVGY TQPALWQLAS AAKGSVRDAL SLTDQAIAFG QGALDDVTVN
SMLGLIDAAD LVSLITDIYN HDKPAVAAHI EQMRAQMVDA SSMFDGLAEL LHQLALCQLL
PEVALNVNEA QAQHIDQLAQ HMSPDVLQLY YEIVVQAREG VKLASTPMQA LEMCILRLLA
FRPLPVDEIL ANVLDSTVMA IEKPTTTVSS ATLITEPVSS SLELQTQSDN IVYENIDTSV
NDKQDVGADN SITQHEQYYS NDEASHLNQY DNSSVYDTLE LSNNQPEPVV EPVVEPVVEP
VVEPVVEPVV EPVVEPVVEP VVEPVVEPVV EPVVEPVVEP VVEPVVEPEV NDSQLLIQSE
DPRALLRCPP QELIGEWTPE KWDYWLQTAR EAASLAQDEL ALARQGMMTG SCNAEAIFVT
AVDSKHLQAT FEQLATKMQV QFPDAAISLR IDSSIAQADD KTPERRQQKR LVEAKTVAES
RLFNTPVMQY LTERGEGKMG KVQLY