Gene Pcryo_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1238 
Symbol 
ID4035788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1508945 
End bp1509415 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content36% 
IMG OID637973703 
Productthioesterase superfamily protein 
Protein accessionYP_580503 
Protein GI93006066 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.546619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.661464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT TAGAAAAATT ACCAGAAATA CAAGAGACGC TTAATAAAGA TAATAACCAT 
CCTATGCATG GTTTTGCAGT CATTTACTCT CAACAAGTAG AGTGGGGCGA TATGGATTCT
TTTGGTCATG TCAATAATGT GGTCTATTAC ACTTATGCCC AAAATGCTCG TATTCACTAT
AACAGCCAAT TAAATCTATT TAATAAAAAC ACTTTTTCAG TCATGGCAGC ATCATCCTGC
CAATATTTCA AACCAGTGGT CTACCCCGAT ACCTTATGGA TTGGAGTTCG AATTAAGAAA
ATTGGCAATG CCAGCTTGAT TCATGAATAT ACCTATTATA GTACCGCTAT GAATACTATC
GTTGCTAGCG GTGAGTCAGT ACTGGTATAT CTTGATAAAG CCACTGGACA AAAGAAAAAT
ATCGACGAGA CAAAAAAAGC CGCTATTAGC GCTTTTGAAA GGGTTCAATA A
 
Protein sequence
MKALEKLPEI QETLNKDNNH PMHGFAVIYS QQVEWGDMDS FGHVNNVVYY TYAQNARIHY 
NSQLNLFNKN TFSVMAASSC QYFKPVVYPD TLWIGVRIKK IGNASLIHEY TYYSTAMNTI
VASGESVLVY LDKATGQKKN IDETKKAAIS AFERVQ