Gene Pcryo_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1233 
Symbol 
ID4035783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1501846 
End bp1503000 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content45% 
IMG OID637973698 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_580498 
Protein GI93006061 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.831269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.440096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAG ATAAGGACGT TCTTAACCAA ATCACCGACA CTATCCGCCA ATTTGTGAAT 
AACCAATTAA TACCGATGGA ACACTGGGTA GCAGAAAACG ACCGTCTTCC AGACGATATC
ATCAATCAAA TGCGCGAGTT AGGGCTGTTT GGACTGACTA TTCCCGAAGA GTATGGCGGG
CTTGGCGTTA CGATGGAAGA AGAGGTCACA CTGGCATTTG AATTAGGACG CACCTCTCCT
GCTTTTCGCT CATTGATAGG GACAAATAAC GGTATCGGCT CATCTGGACT AGTCATTGAT
GGTACTGAAG CGCAAAAACA GAAATATCTA CCAAGGCTCG CCAGTGGTGA AATCATCGGC
TCATTTTGTT TGACCGAGCC GGATTCTGGC TCAGATGCCG CTTCATTAAA GACCACTGCT
ATCAAGGACG GTGATACCTA TATTATCAAC GGTACTAAGC GCTATATTAC CAACGCCCCT
GAAGCCGGCG TATTTACCGT AATGGCACGT ACTGACCCAC AAAATAAAAG ATCGGGTGGC
ATTTCAGCCT TTATCGTTGA GAGCGATACC CCTGGTATTA CTTTGGGTAA AATTGACAAA
AAAATGGGAC AAAAAGGCGC TCATACCTGT GATGTTATCT TTGATAATTG TATCGTGCCT
GCTGATGCTT TGATTGGTGG TGTCGAAGGT GTAGGTTTCA AAACCGCGAT GAAAGTACTT
GATAAAGGGC GCCTACATAT TGCTGCAGCG AGTACCGGAG CCGCTACTCG TATGTTGGAT
GATGCATTAC ATTATGCCGT TGAACGTAAG CAGTTTGGGC AACCGATTGC CAACTTCCAA
CTTATTCAAG CGATGCTCGC TGATTCAAAA GCGGAAATTT ATGCGGCTAA ATCTATGGTA
TTAGACGCCT CACGCCTGCG TGATGAAGGT AAAGATGTCG TCACTGAGTC CTCCTGTGCC
AAGATGTTTG CTACTGAAAT GTGTGGCCGC GTTGCTGATA GAGCTGTGCA AATTCATGGC
GGTGCGGGTT ATATTGCCGA TTATGGCATT GAGCGTTTTT ATCGTGATGT GCGCTTATAT
CGTTTATATG AAGGTACGAC TCAGATTCAG CAGATTATCA TCGCCCGTAA TATGATTAAA
GAAGTAAGTG AATAG
 
Protein sequence
MIRDKDVLNQ ITDTIRQFVN NQLIPMEHWV AENDRLPDDI INQMRELGLF GLTIPEEYGG 
LGVTMEEEVT LAFELGRTSP AFRSLIGTNN GIGSSGLVID GTEAQKQKYL PRLASGEIIG
SFCLTEPDSG SDAASLKTTA IKDGDTYIIN GTKRYITNAP EAGVFTVMAR TDPQNKRSGG
ISAFIVESDT PGITLGKIDK KMGQKGAHTC DVIFDNCIVP ADALIGGVEG VGFKTAMKVL
DKGRLHIAAA STGAATRMLD DALHYAVERK QFGQPIANFQ LIQAMLADSK AEIYAAKSMV
LDASRLRDEG KDVVTESSCA KMFATEMCGR VADRAVQIHG GAGYIADYGI ERFYRDVRLY
RLYEGTTQIQ QIIIARNMIK EVSE