Gene Pcryo_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1192 
Symbol 
ID4036010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1444477 
End bp1445301 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content43% 
IMG OID637973657 
Productexonuclease III 
Protein accessionYP_580457 
Protein GI93006020 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.479841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TTGTTTGTTT TAATATCAAT GGTATCCGAG CTCGTCAACA TCAGCTGGAG 
GCGGTGCGAG ATATTATCGA TCCTGATGTC ATGGGTCTGC AAGAAACCAA GGTGCATGAT
GAGCAGTTTC CCCTTGAAAA TGTAGAAGGC TTGGGCTATC ACGTCGAGTA TTTTGGACAG
AAAGCGCATT ACGGTGTGGC ATTATTATCG AAAGTTGCGC CTATTTTTGT GCAAAAGGGT
TTCCCTAACG AAGATGAAGA GGCGCAAAAA CGTTTTATTC ATGCGCGTTA TGAGTTTGAT
GGGCGTGAGA TTGATGTGCT CAATGGCTAT TTCCCACAGG GTGAGAGTCA AGATCATCCG
ACCAAATTTC CGATGAAACG TGCTTATTAT GCTGATTTAA TGGCCTATAT TGATACGCTA
AAAGCAGAAG GGCGCTCGCT AGTGATTATG GGGGATATGA ATATTGCCCC AGAAGACATC
GATATTGGAA TCGGTGAAGT AAATGCTAAG CGCTGGTTGA AAAATAGAAA AACTTCCTTC
CTACCTGAGG AGCGTGAGTG GTATAGCAAT CTTATGTCAC GTGAGTTGAC TGATACCTAC
CGTTTGCATT ATCCAGAAAG CACCGAATTA TACAGCTGGT TTGATTATCG CAGTCGCGGT
TTTGATGATG ATCCTAAGCG TGGATTGCGT ATTGATCATA TTTTATGTAC GCCTGATCTT
GTTGAATGTT GTGTTGATGC GGGTATCAGC TATGAGCTGC GCGCTATGGA AAAACCCTCT
GACCATGCGC CTATTTGGAC AGCATTTGAT TTAAACAAAG TATGA
 
Protein sequence
MTRFVCFNIN GIRARQHQLE AVRDIIDPDV MGLQETKVHD EQFPLENVEG LGYHVEYFGQ 
KAHYGVALLS KVAPIFVQKG FPNEDEEAQK RFIHARYEFD GREIDVLNGY FPQGESQDHP
TKFPMKRAYY ADLMAYIDTL KAEGRSLVIM GDMNIAPEDI DIGIGEVNAK RWLKNRKTSF
LPEEREWYSN LMSRELTDTY RLHYPESTEL YSWFDYRSRG FDDDPKRGLR IDHILCTPDL
VECCVDAGIS YELRAMEKPS DHAPIWTAFD LNKV