Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1188 |
Symbol | |
ID | 4035394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1438035 |
End bp | 1438910 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637973653 |
Product | short chain dehydrogenase |
Protein accession | YP_580453 |
Protein GI | 93006016 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0152839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.145128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGC AAAATAAATT ACTGAGCCTA GTGGCAAAAA AAGCCACCAA AAGTAAAAAT CAATTATTTG GCGCGGTTCA ACCAGCACGT TATTTAAAAG GTTTAAATAA ACAGCAGATT GGTCGTGGCA AAACGGTTTT AATCACGGGT GCCAGCTCAG GGTTGGGCGA GGGCATGGCG AGATTGTTTG CTAAGCTTGG ATACAACCTT GCTATTTGTG CGCGTCGTAC GGATCGTTTA GAGAGTCTAC AAATAGAGCT GATGGCACAA TATCCTGATA TTCGTATCGA GTATCGAGTG CTAGACGTTA GTGATTATGA TGCGATTTTT GAAGTGTTTG ATGCCTTCAC GGCTGACTTT GGTCATATTG ATCGTGTTGT GGTCAATGCA GGCATTGGCG AGAGCCGCCG TATTGGTAAA GGACGCTTTG ATACCAACCG CCGTACGGTT GAAGTTAACT TTATCTCAGC GCTCGCGCAG TGTGAAGCAG CGATGAGTAT CTTTCGCGCA CAAAATAGCG GCCATTTGGT CGTGATATCT AGTATGTCAG CGATGCGTGG ATTACCTAAG CACTTGACTG CCTATGGTGC GAGTAAAGCA GGTTTGGCAC ATTTGGCAGA GGGCATCCGT GCTGATATGC TATTGACCAA ACTGCCGATC AAAGTCTCTA CTATTTATCC AGGCTATATC CGTACTGAAA TCAATGAAAA TGCCAAGCCA TTACCGTTTG AAGTAGATGC AGATACGGGC ACCAAATCCA TCGTTGCAGC GATTGAAGCT GAGGTTGATG AAGCTTGTGT ACCCAGTCTA CCATGGTCTA TCGTCGGTCA AGCAATGAAG CACTTGCCAT TGCAGGTGGT CAATAAAGTC AGTTAG
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Protein sequence | MSMQNKLLSL VAKKATKSKN QLFGAVQPAR YLKGLNKQQI GRGKTVLITG ASSGLGEGMA RLFAKLGYNL AICARRTDRL ESLQIELMAQ YPDIRIEYRV LDVSDYDAIF EVFDAFTADF GHIDRVVVNA GIGESRRIGK GRFDTNRRTV EVNFISALAQ CEAAMSIFRA QNSGHLVVIS SMSAMRGLPK HLTAYGASKA GLAHLAEGIR ADMLLTKLPI KVSTIYPGYI RTEINENAKP LPFEVDADTG TKSIVAAIEA EVDEACVPSL PWSIVGQAMK HLPLQVVNKV S
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