Gene Pcryo_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1188 
Symbol 
ID4035394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1438035 
End bp1438910 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID637973653 
Productshort chain dehydrogenase 
Protein accessionYP_580453 
Protein GI93006016 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0152839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGC AAAATAAATT ACTGAGCCTA GTGGCAAAAA AAGCCACCAA AAGTAAAAAT 
CAATTATTTG GCGCGGTTCA ACCAGCACGT TATTTAAAAG GTTTAAATAA ACAGCAGATT
GGTCGTGGCA AAACGGTTTT AATCACGGGT GCCAGCTCAG GGTTGGGCGA GGGCATGGCG
AGATTGTTTG CTAAGCTTGG ATACAACCTT GCTATTTGTG CGCGTCGTAC GGATCGTTTA
GAGAGTCTAC AAATAGAGCT GATGGCACAA TATCCTGATA TTCGTATCGA GTATCGAGTG
CTAGACGTTA GTGATTATGA TGCGATTTTT GAAGTGTTTG ATGCCTTCAC GGCTGACTTT
GGTCATATTG ATCGTGTTGT GGTCAATGCA GGCATTGGCG AGAGCCGCCG TATTGGTAAA
GGACGCTTTG ATACCAACCG CCGTACGGTT GAAGTTAACT TTATCTCAGC GCTCGCGCAG
TGTGAAGCAG CGATGAGTAT CTTTCGCGCA CAAAATAGCG GCCATTTGGT CGTGATATCT
AGTATGTCAG CGATGCGTGG ATTACCTAAG CACTTGACTG CCTATGGTGC GAGTAAAGCA
GGTTTGGCAC ATTTGGCAGA GGGCATCCGT GCTGATATGC TATTGACCAA ACTGCCGATC
AAAGTCTCTA CTATTTATCC AGGCTATATC CGTACTGAAA TCAATGAAAA TGCCAAGCCA
TTACCGTTTG AAGTAGATGC AGATACGGGC ACCAAATCCA TCGTTGCAGC GATTGAAGCT
GAGGTTGATG AAGCTTGTGT ACCCAGTCTA CCATGGTCTA TCGTCGGTCA AGCAATGAAG
CACTTGCCAT TGCAGGTGGT CAATAAAGTC AGTTAG
 
Protein sequence
MSMQNKLLSL VAKKATKSKN QLFGAVQPAR YLKGLNKQQI GRGKTVLITG ASSGLGEGMA 
RLFAKLGYNL AICARRTDRL ESLQIELMAQ YPDIRIEYRV LDVSDYDAIF EVFDAFTADF
GHIDRVVVNA GIGESRRIGK GRFDTNRRTV EVNFISALAQ CEAAMSIFRA QNSGHLVVIS
SMSAMRGLPK HLTAYGASKA GLAHLAEGIR ADMLLTKLPI KVSTIYPGYI RTEINENAKP
LPFEVDADTG TKSIVAAIEA EVDEACVPSL PWSIVGQAMK HLPLQVVNKV S