| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1182 |
|---|
| Symbol | |
|---|
| ID | 4035388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1429990 |
|---|
| End bp | 1430916 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637973647 |
|---|
| Product | lipid A biosynthesis acyltransferase |
|---|
| Protein accession | YP_580447 |
|---|
| Protein GI | 93006010 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.484152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00223707 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGT ATCATATTTT CAAAATCGTG CCACTGTCTG TCTTGCAGAT GCTGGCACGT
TTTGTGGCGT GGATAATCTT AAGGATGCCA AGCGCTAGTA TCATGCGCAC AGTTAAAATC
AATATGGCAC TGATTGCCCC TACGTTATCT CACCTGCAAA AACAAGCCTT AACCAAAGAG
ATTATCTATC ATCAATGTTT AACCAGCATT GAGTCAATCA AAAGCTGGGC GATGCCACCT
GATTGGAGTA TCGCTCAAAT TCGTGACGTT CATAATAAAG ACATCTTACT TGATGGACTT
GCTAGTCCTA ACGGCATGCT CGCGATCGTA CCGCATTTGG GTACGTGGGA GATGATGAAT
GCTTGGCTCA ATCAATTTGG CTCGCCAACC ATCATGTATA AGCCCGTAAA AGGTGACATT
ACCAACAATT TTATATTGCA AGGTCGTGCC CGCCTCAATG CGACATTAGT ACCGACGGAT
GGTAGCGGTG TAAAAGCAGT ATTTAAAACA CTCAAACAAG GTGGTTTTAG TATTGTCTTA
CCTGACCACG TTCCTGACCC ATCAGGCGGT GTCATCGTGC CTTTTTTTGG CATTGAAACG
TTGACCAGTA CACTCGCCTC CAAACTGGCT AGTAAAACCA AATGCGCACT GGTCGGATTG
GCATGTATTC GCCGCGACGA TGGGCATGGC TTTGATATTT ATTGCTATAA ACTCGATGAC
CCAGCATTAT ATGATCGCAA TACTGAAACG GCAGCTTATG CACTCAATCT AGCAATGCAA
CGTATGATTG AAGACAATTA CAGTCATTAT ATGTGGGGTT ATCGACGCTT TAAGCATATC
CCTATGATAG ACAACCCTTA CAACACTAAT AAAGCCAATC TAGCCGCATT TATTCGCGCA
CATCATCCTA GTGTCGATAA TAAATAA
|
|---|
| Protein sequence | MNPYHIFKIV PLSVLQMLAR FVAWIILRMP SASIMRTVKI NMALIAPTLS HLQKQALTKE
IIYHQCLTSI ESIKSWAMPP DWSIAQIRDV HNKDILLDGL ASPNGMLAIV PHLGTWEMMN
AWLNQFGSPT IMYKPVKGDI TNNFILQGRA RLNATLVPTD GSGVKAVFKT LKQGGFSIVL
PDHVPDPSGG VIVPFFGIET LTSTLASKLA SKTKCALVGL ACIRRDDGHG FDIYCYKLDD
PALYDRNTET AAYALNLAMQ RMIEDNYSHY MWGYRRFKHI PMIDNPYNTN KANLAAFIRA
HHPSVDNK
|
|---|
| |