Gene Pcryo_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1135 
Symbol 
ID4033755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1370586 
End bp1371044 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID637973600 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_580400 
Protein GI93005963 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAA GTCCCTATCG CCGTGAGAAA AAAGCACTGA ATGCGGAGAT GAACGTTGTT 
CCTTATATCG ACGTAATGCT CGTTCTGCTC GTGATATTTA TGGTGACCGC GCCGATGCTG
ATTACTGGCG TCGATGTTGA TTTGCCAAAA GAGCAAACCA ACACCATGAG TCAAAGCCAG
CTACCAGTCA TTGTATCTCT GACCGGTAAC GGCGAGATTT TTATCAGTTA TGAGAGCAAT
GTTGACTTAC CTGTTAGTGA GCCTGAGCTG ATTGATACCC TCTCGACTTT GCAAAGTCAA
AGCAGTGATG CCGGTGCGCA ACCAGTACAA GTGATGATTA ATGCCGACCA AAACAATCAA
TATGGCGCTA TCATGACTTT GATGGCAACG TTGCAACAAG CTGGTATTCA GAAGGTTGGA
CTATTAACTG GCGCTCCATT GCCTATACCA GCGGTTTAA
 
Protein sequence
MKQSPYRREK KALNAEMNVV PYIDVMLVLL VIFMVTAPML ITGVDVDLPK EQTNTMSQSQ 
LPVIVSLTGN GEIFISYESN VDLPVSEPEL IDTLSTLQSQ SSDAGAQPVQ VMINADQNNQ
YGAIMTLMAT LQQAGIQKVG LLTGAPLPIP AV