| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1112 |
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| Symbol | |
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| ID | 4033655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1338351 |
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| End bp | 1341416 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637973577 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_580377 |
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| Protein GI | 93005940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0269179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.029477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTG TGTCATCAAA CTATCGCTCA TTTATAGCTT TACCATTGAC GCTTGCGGTG
TCAACTCTTC TTATCAGTGC GTGTAGTAAT ACATCAGCGG TGAAAAAGAC GGGGGCGACT
GGCAGCACAG CTGTGGTTAA GCGTCCTACC ACGCAAGTTC AGCCAACGGG AAATGCAGAT
TATTCGACTG CATTTTTGGA TGCTGAAAGC TTAGATGAGC TTGCTGATTT ATTGGAAGCC
ACTGATATGA CTATGGTTGA GGGCAACAAA CTTGCTATTC AACAATATGG TGACTTGTGG
AATCGCCTGC GTGCTGGGTA TCGGATGAAC GGTGGACAGC CGGTTTATAA TCAGCGTATT
GAAGCACAAA AAGGCTGGTT TACCAGTAGA CAGGACTATC TAAACCGTTT AACAGCGCGT
GCCAGTCGCT ATATTTATCA CACAGTAAGA GAGGCAGAGC GTCGCAATAT CCCAACCGAG
CTGGCTTTGC TGCCTGTGAT TGAGAGCTCC TACGATCCAA GTGGTACCAG TAGTGCGGCA
GCGGCAGGTT TATGGCAGTT TATTCCGAGT ACGGGACGTA TTTATGGTCT AAATCAAAGC
AGTACATATG ATGGTCGCCG TGATGTGATT GAGTCAACAC GTGCCGCTTA TGACTTTTTG
ACGGCATTGC ACAATCAGTT TGGTAGTTGG GAGCTGGCAT TAGCCGCTTA TAATGCCGGT
CCTGGTCGTG TGCAAAAAGC CATTGATGCC AATAGAGCTC AAGGTTTACC TACCGACTAT
TGGTCACTCA GATTACCGAC TGAAACCATG AACTATGTAC CACGCTTTTT GGCAGTTGCC
GAAATCGTTG CCAAACCTGA AAAATACGGT GTCTATTTGC CGGCTATCGC TAACCGTCAG
CATTTCCGTA GTGTGCCTGT CAACTATGGC GTAAGCTTAG CCGAAGTATC GCAAGTCACG
GGTGTTAGCT ACGATGAATT AGAAAGATTA AATACGGCGT TAACCTCAGC ACGTATCGAT
TCATCAGGTC CGCAGCGTAT TATTATTCCT AATGATGTCA GTCTGACCAC TGATGTGAAG
CTGAGCGCTT TGAGGGGTAA TGGCAGTAGT AATATTCTCG CCTCTAGCAA TGCTGTTACG
ACGACTACGC CAAGCTACTC TGGGTCAACA ACGCCAAGCT ATAATAATAG GCCATATACT
ACCAGCTCAT CATTACCCGG TACTGGCAAA GGTCTTGCTG ACTATGCTGC CAGTGCGAGC
GTCCCGCAGC AAACCACCAG CTATATTCCG CCATCGTCAT CAACGACCAG CAGCTCAGTT
TATAGCAGCA GTGCCTCAGT GCGTACAGAG CCACCTTTAA CCTCAGCAGA GACCAAAAAA
ATCAATGCTG AGCTGAAAAG TAGTAACAGC TTACCGACCA CATCAGCGCA AATCACTCAA
AACAATACCA TCATTCAAGA GCCGCCGCTA AGTAAAGCGG AGCGTGATTT TATTGCCAAT
CAAATTCGTA TTAATACGCC TGAAACCAAT GTCATTAACG CCGATGGTAA TATTAATTTA
TCTGCCGTGC AGACGCAGCA GTCCGTCTTA GAAGCCACGG GACAAGAGAA GAAACTGAGC
TTCCCAAAAA CCTCAGTTAG TAAGCCAAAA CCACAAGGCA CACGTACCAC TTATACGGTC
AAACGCGGTG ATACTTTGGT TAATATTGCC AGTCGCTCTG GTGTGAGCTG GCGTGATATT
GCCGAATGGA ATCAGATGGA TGCCAGTGCC AAGCTACTCT CTGGTAGTAC TTTGTATCTA
TATAATGCCA AAACTATCGA GCCATTGAGC GCTACCAGCA GCACTGTCGC GAGCCAGCCT
GAAAGTTATG TGGTACAAGG TGGCGATACG CTTATAGGTA CTGCCAATCG CTTTGGTTTA
TCAGTGACGC AGTTAGCAAG TTATAATAAT TTGAGCAGCC GTGCAGACTT ATTAAGAGGT
CAGAAACTAT GGCTTATCCC AGGCAAAGTA ACAGCACCAG TCAGCACTCC TGCCGCGCCA
TCTACTAAAC CCAAGAAGTC ATCGACTGCG ACCAAAAACT ATAAAGTAAA AGCAGGTGAT
GGCTTGATTG CACTTGCACG CCAATTTAAT ATAACGACTG AGACATTGGC CAGTCTTAAT
GATATTGGTA CGACAGATTC ATTATACGTC GGTCAAACCT TAAAAGTACC TGCCAGTGTA
GACTTTACTT CTAACAGTGC GCCTACTGCT ACACAGAGCA CTGCTAATAG CAATAACACC
ACAACCAAAG CCAGCAGTTC AAGTTCAGTG CCGACTAGCA ATTATAAAGT CAAATCAGGG
GATACCTTGA TTGGCATTGC TAATAGTGTT GGGGTCAGCG CAGAAGATAT TGCTGCCGTA
AACAGTAACT TTGATGCTAA GGCGCGTTTG CAACGTGGAC AAACGATTAA AGTTCCTGTA
TCAAAAGAAT TGGTTGATCG TCAGCTAAAT GATGAGGCAG TCAGCTACAA GGTAAAATCA
GGCGATACTT TGACGGGTGT TGCTCAGCGT TACAATATTG GCTTGGGTGA TTTGGCAGCA
GCTAACAATC TCAAGACCAA TTCTAACTTG ATCTTAGGTC GCACGATTAC CATTCCTGCT
AAAGGTAGCG TGAGTACTAG TGCCAATGCT GCGGCCAGTA GCAAGAGCAG TAGTTCGGTG
AGCACAGAGA CAAATAGTAA GTCTGATAGC GCGCCAGCTA CCAGTAATAG CGGCAAAAAG
CTCGGCAACA CAGAAAGCTA TAAGGTGCAG TCTGGCGATG GACTCATCGC TTTAGCACGC
CGCTTCGGTG TTTCAGTTGA AGACTTGGCT GCTACCAATG ATATTTCGAC TAAAGCTCAG
TTACAACGTG GTCAGACCAT CAAAGTGCCG AAATTAACGG TCAGCTATAC GGTTGGCTCA
GGAGACAGCT TAATTGGTTT GGCACGTAAA TACGACGTTT CAACCAAAGA GCTTGCGGAT
ATGAATGACA TTGCAGTCGA TACCATGCTG CAACGTGGTC AACGCTTAAC GGTGCCTAAT
CGCTAA
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| Protein sequence | MSTVSSNYRS FIALPLTLAV STLLISACSN TSAVKKTGAT GSTAVVKRPT TQVQPTGNAD
YSTAFLDAES LDELADLLEA TDMTMVEGNK LAIQQYGDLW NRLRAGYRMN GGQPVYNQRI
EAQKGWFTSR QDYLNRLTAR ASRYIYHTVR EAERRNIPTE LALLPVIESS YDPSGTSSAA
AAGLWQFIPS TGRIYGLNQS STYDGRRDVI ESTRAAYDFL TALHNQFGSW ELALAAYNAG
PGRVQKAIDA NRAQGLPTDY WSLRLPTETM NYVPRFLAVA EIVAKPEKYG VYLPAIANRQ
HFRSVPVNYG VSLAEVSQVT GVSYDELERL NTALTSARID SSGPQRIIIP NDVSLTTDVK
LSALRGNGSS NILASSNAVT TTTPSYSGST TPSYNNRPYT TSSSLPGTGK GLADYAASAS
VPQQTTSYIP PSSSTTSSSV YSSSASVRTE PPLTSAETKK INAELKSSNS LPTTSAQITQ
NNTIIQEPPL SKAERDFIAN QIRINTPETN VINADGNINL SAVQTQQSVL EATGQEKKLS
FPKTSVSKPK PQGTRTTYTV KRGDTLVNIA SRSGVSWRDI AEWNQMDASA KLLSGSTLYL
YNAKTIEPLS ATSSTVASQP ESYVVQGGDT LIGTANRFGL SVTQLASYNN LSSRADLLRG
QKLWLIPGKV TAPVSTPAAP STKPKKSSTA TKNYKVKAGD GLIALARQFN ITTETLASLN
DIGTTDSLYV GQTLKVPASV DFTSNSAPTA TQSTANSNNT TTKASSSSSV PTSNYKVKSG
DTLIGIANSV GVSAEDIAAV NSNFDAKARL QRGQTIKVPV SKELVDRQLN DEAVSYKVKS
GDTLTGVAQR YNIGLGDLAA ANNLKTNSNL ILGRTITIPA KGSVSTSANA AASSKSSSSV
STETNSKSDS APATSNSGKK LGNTESYKVQ SGDGLIALAR RFGVSVEDLA ATNDISTKAQ
LQRGQTIKVP KLTVSYTVGS GDSLIGLARK YDVSTKELAD MNDIAVDTML QRGQRLTVPN
R
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