| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1052 |
|---|
| Symbol | |
|---|
| ID | 4033887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1265233 |
|---|
| End bp | 1265868 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637973517 |
|---|
| Product | OmpW |
|---|
| Protein accession | YP_580317 |
|---|
| Protein GI | 93005880 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC AATCCCTAGT TTTAGCCGCT GCTACTGCAC TTACTATGAC CACTGCTTTT
GCTGTACCTG CAGGCACTTG GACAGTTGCC GCTGGTGCGC ATTATGTTGA TCCTAAAAAT
GATAATGGTG ATGTCACTAT AGGGGGCACA AGCTATGCTG TAGATGTTGA TGGTGATGTC
CGTCCAACCA TCAGTGGTGA ATACTTTATC GCTAATAACG TTGGTGTTGA ACTACTCGCT
GCCATTCCAT TTCATCATGA CTTTACCTTA ACTGATGCTT TAAATAATGA GATCACTGGT
AGAACTCAGC ATTTACCACC AACGCTTTCT CTACAATATC ACTTCGATGA TTATAACCTA
CCTATGAATG TAAAACCGTT TGTGGGTGTT GGTGTAAACT ACACGATGTT CTTTAAAGAA
AAAGCAAACG TTGTAGGTAC TGAATTAAAG CTTGATGATA GCGTTGGTGT TGCTGGTCAT
ATCGGTCTTG ATATCCCATT TGCTGCCACT GAGTCTTTCC GTATTGATGC TCGCTATATG
GACATCAAAA CTGACGCTAC TTTGAACGGT ACTGACATTG GCAAAATCGA CATCAGTCCT
TGGGTTTATG GCGTTGCCTT TGTAAAACAG TTCTAA
|
|---|
| Protein sequence | MKLQSLVLAA ATALTMTTAF AVPAGTWTVA AGAHYVDPKN DNGDVTIGGT SYAVDVDGDV
RPTISGEYFI ANNVGVELLA AIPFHHDFTL TDALNNEITG RTQHLPPTLS LQYHFDDYNL
PMNVKPFVGV GVNYTMFFKE KANVVGTELK LDDSVGVAGH IGLDIPFAAT ESFRIDARYM
DIKTDATLNG TDIGKIDISP WVYGVAFVKQ F
|
|---|
| |