Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1044 |
Symbol | |
ID | 4033879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1248157 |
End bp | 1248849 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637973509 |
Product | TetR family transcriptional regulator |
Protein accession | YP_580309 |
Protein GI | 93005872 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000181846 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA ATAAAGACGA CAAAATTGAA GATGTATTAG TAGATTCGGA GCTGGCAAAA AAGTTGGTGC CGAATAAGTT TAAGTTTACT AGCCAGCAAG GACGCGCCCG CCGTCAAAAA TTGTTGATGG GTGCTAAAAA GTTGAGTGAA ACTCAATCTA TTAATGATAT TACGCTTGCC GCTGTCTGCG AAGAAGCGGG TATTCCACGG GCGTCTGCTT ATCATTTCTT CCCTAATATT GAAGCCATAT TTTTGGCGCT GCGTTTTTTA AATGCTATTG ATATTTTAGA TGTATTGAGA ACCGTTGAAA CGGTTAAATA TGATAGATGG CAAGGGTATC TTACAGCGCT GATTGATCGC TGTGTACAAA TTTTTGATGA AGATCAAACC AAAGCCAAAT TAATTTATGA TACCAATACG CCTGATTTTG AAGGCGACAG TTTTGGCGAG CATATGGATC ACCAAGTAGT AAAATTGGTC TATGATCGTT TGGCTGAACG CTATGAAGTG CCTAAGTTTG AAGATATTCA AGATGTCTTA TTGATTACCT TTAGTATCGT GAATGCGATC TTTACTGTTT CTTATCGTCG TCATGAGCGT ATTACCGATA AGTATTTGCA AGAAGCTAAT ACGGCATCTA TCGCTTATCT GCGTTGTTAC TTGCCAGAGA AGCTACCGCG TAAAGACCGT TAG
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Protein sequence | MSENKDDKIE DVLVDSELAK KLVPNKFKFT SQQGRARRQK LLMGAKKLSE TQSINDITLA AVCEEAGIPR ASAYHFFPNI EAIFLALRFL NAIDILDVLR TVETVKYDRW QGYLTALIDR CVQIFDEDQT KAKLIYDTNT PDFEGDSFGE HMDHQVVKLV YDRLAERYEV PKFEDIQDVL LITFSIVNAI FTVSYRRHER ITDKYLQEAN TASIAYLRCY LPEKLPRKDR
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