| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0948 |
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| Symbol | |
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| ID | 4035940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 1126760 |
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| End bp | 1129924 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637973411 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_580213 |
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| Protein GI | 93005776 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000568458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTAACG TCAGCGATAT AGAAAGACTC ACTCAAAACC GTGTCGTACG CTTCTTTACC
GACACGCTAG GTTATCGCTA TCTAGGTGAC TTTAAAGATA GACCTAATAA CAAGAATATT
GAGTCTGAAA TTTTGGCAGC ATGGTTAAGC TCACGTAATG TCAGTCGCAC TTTGCAAAAC
CGAGCCATTA ACGCTTTAGA AAAAGCCGCC GCTCTCGGCA GTGGCGTTAA ACTATACGAT
GCCAATAAAG AGGTGTACCG ACTACTACGT TATGGTGTCA AAGAAAAAGA AGGTACTGGC
GATCATAAAG AAACCATCTG GCTGATTGAT TGGCACAATA TTGAGGCCAA TGACTTTGCT
ATTGCTGAAG AAGTCTCTAT CAATGGCGAA AATAAAAAAC GTCCTGATAT CGTCCTTTAT
GTCAACGGCA TTGCATTGGG CGTTATTGAG CTTAAACGCT CTACCATTAA CGTCACCGAA
GGCATTCACC AGAACCTAGA CAATCAGAAA AAAGAATTCA TTCGTAGCTT CTTTAGCACC
ATTCAACTGG TTATGGCAGG TAATGACACC CAAGGCTTGC GCTATGGCAC CATTGAAACG
CCAGAGAAAT ACTATCTGGA ATGGAAAGAA GCCAACCCCA ATCATACACC CCAGTCTGAT
ATTAGCGTAC CGACGCATCT TACCTTAGCA AAGGCTAACT TCACCGATCA GCCCTTAGAC
TTCCATCTAT ATCATATGTG CAATAAGCAA AGGTTCTTAG ACATCATTAA TAACTTTATT
GTATTTGATT CAGGTGTAAA AAAGACTTGC CGACATAATC AATTCTTTGG GATACAATCC
ACTAAGAAGC ATATTGCACA ACGCAGAGAT GGGATTATTT GGCATACGCA AGGTTCAGGT
AAAAGCTTGA CTATGGTTTG GATGGCTAAA TGGATACGGG AGAATGTTAC CAATAGTCGC
GTACTTATTA TTACTGACCG TACCGAACTT GATGAACAAA TTGAAAAAGT ATTTTTTGGT
GTTGATGAAT CAATATATCG CACCAAGAGC GGTGCTGATC TTATTACCCA GCTAAATCAG
CCTAACCCTT GGTTACTGTG TTCTTTGGTG CACAAATTTG GCCGTCACGG TGGTGACGAT
GATGCAATGG ACACAGAGGA TTTTATAAAG GACATTCAAG CCAGCCTACC CTCAGACTTT
AGCCCTAAGG GCGATTTATT TGTCTTCGTT GATGAGTGTC ACCGCACTCA ATCTGGCAAG
CTGCACAGCG CTATGAAGGC GCTGTTACCA GAAGCGATGT TTGTCGGTTT TACCGGCACG
CCACTGCTTA AAAAAGATAA AAAGAAATCT ATCGAAGTGT TTGGACCTTT TATTCACACC
TATAAGTTTG ATGAAGCAGT CGCTGATGGG GTGGTGTTAG ATCTTCTGTA TGAAGCACGT
GACATTGATC AACAGCTTAC CTCATCTAAA AAAGTTGATG AGTGGTTCGA CGCTCATACC
CGCGGCTTAA CCAATATTGC CAAGAGCCAG CTTAAGCAAA AATGGGGAAC CATGCAGCGG
GTTCTGTCTA GCCAGTCGCG CATAGAGTGC ATCGTCAATG ACATCTTGCT CGATATGCAG
AAAAAGCCAA GGCTTATGGA TGGTCATGGC AATGCCATGC TTGTGTGCAA CAGTATTTAT
CAAGCCTGTA AATCTTACGA AGCCTTTGAA AACTCTTTCT TGAAAGGCAA AGTAGCAATT
GTGACCAGTT ACCTACCGAC TGCAGATAGC ATTAAAGGTG AGGAAACTGG CGAAGGAATG
ACAGAGAAGC TTTTCAAATA TCAAATTTAT CGCAGGATGA TTGCCGATTA TTATGATATC
AGCGAACAAG AAGCAGGCTC TAAAGCAGAG GACTTTGAGA AAGCTGTTAA AAAACGCTTT
ATTGAAGAAC CAGGTCAAAT GCGACTGTTG ATAGTTGTAG ATAAACTGCT GACAGGATTT
GATGCGCCTT CTGCTACTTA TCTATACATT GATAAAAAGA TGGCTGATCA CAACCTCTTT
CAGGCCATTT GCCGTGTTAA TAGACTCGAT GGTGCAGAAA AAGACTATGG ATATATCATT
GACTATCAGG ATCTATTTCA GTCTTTAAAC AGTACCATTT CTGATTATAC GCAAGGTGCA
TTTTCAGAGT ATGAAGATGA AGATATTGAT GGGCTGTTAA AGAACCGCTT AAGTGCGGCG
AGACAAAACC TAGATGATGC CCTAGAGATG GTCAGAGGAC TTTGTGAGCC TGTTAAGTAC
CCTAGAAATA CACAGGACTA TGCCGCTTAC TTTTGCCCTA GTGAAGATGT AACTGAAGCT
GATAAAGTAG AAAAGGAACA ACTGCGCCTC ACCTTATATA AAAGCGTCTC TAAGCTGATA
CGTGCTTATG GCAATATCGC CAATGAAATG GCGGAAGCGG GATATAGCGA TCAGGAAATC
AAACGCATTA AAGACGATGT AAAACACTTT GAGTCCGTGC GTAATAACAT CAAGCTTATG
AGTGGCGACC ATATCGATAT GAAAAGCTAT GAGCCGACCA TGCGTAGGAT GTTAGACACT
TATATTCATG CTACACCTAG TGAGACTGTT ATCGACTTTG AAGATTTAGG ACTCATTGAG
TTAATTGTCA ATCAAGGGTC TGAAGCTTTA ATCAAAGCCA TACCTGAAGA TATAGCGAGC
AACCCTGAGA ACGTAGCTGA GACTATCGAG AATAACGTGC GTAAAACGAT TGTGGATGAA
AATCCAGTCA ACCCAAAATA CTACGAGCAT ATGTCTGCCC TACTCGATGA GCTCATTGAG
CTACGCCGAA AAAAAGCCAT TGCCTACGCT GAATACTTGC AAAAGATACG CCAGCTAGCC
TCTAAAGTAA TCAATCCTAC GGGTAGCGCA GGTGGTCATG CATACCCTAA GACTATCAAC
ACTCCTGCGA AACGCGCGTT ATATGATAAC TTGGATCAAA ACGAGGACTT AGCAGACAAA
GTAGATGCTG CTATTAGGCT CAATAAACAG GCTGATTGGC AAGGTCATCT GATTAAAGAG
CGAAAAATTG AGCGTGCCGT ACATCAAACT GTTTCTCAGT ATCAGGTCGA TGTCGATATA
GAGGCGTTAA TTAATTTGAT TAAGGCACAA CAGGAATATC AGTGA
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| Protein sequence | MSNVSDIERL TQNRVVRFFT DTLGYRYLGD FKDRPNNKNI ESEILAAWLS SRNVSRTLQN
RAINALEKAA ALGSGVKLYD ANKEVYRLLR YGVKEKEGTG DHKETIWLID WHNIEANDFA
IAEEVSINGE NKKRPDIVLY VNGIALGVIE LKRSTINVTE GIHQNLDNQK KEFIRSFFST
IQLVMAGNDT QGLRYGTIET PEKYYLEWKE ANPNHTPQSD ISVPTHLTLA KANFTDQPLD
FHLYHMCNKQ RFLDIINNFI VFDSGVKKTC RHNQFFGIQS TKKHIAQRRD GIIWHTQGSG
KSLTMVWMAK WIRENVTNSR VLIITDRTEL DEQIEKVFFG VDESIYRTKS GADLITQLNQ
PNPWLLCSLV HKFGRHGGDD DAMDTEDFIK DIQASLPSDF SPKGDLFVFV DECHRTQSGK
LHSAMKALLP EAMFVGFTGT PLLKKDKKKS IEVFGPFIHT YKFDEAVADG VVLDLLYEAR
DIDQQLTSSK KVDEWFDAHT RGLTNIAKSQ LKQKWGTMQR VLSSQSRIEC IVNDILLDMQ
KKPRLMDGHG NAMLVCNSIY QACKSYEAFE NSFLKGKVAI VTSYLPTADS IKGEETGEGM
TEKLFKYQIY RRMIADYYDI SEQEAGSKAE DFEKAVKKRF IEEPGQMRLL IVVDKLLTGF
DAPSATYLYI DKKMADHNLF QAICRVNRLD GAEKDYGYII DYQDLFQSLN STISDYTQGA
FSEYEDEDID GLLKNRLSAA RQNLDDALEM VRGLCEPVKY PRNTQDYAAY FCPSEDVTEA
DKVEKEQLRL TLYKSVSKLI RAYGNIANEM AEAGYSDQEI KRIKDDVKHF ESVRNNIKLM
SGDHIDMKSY EPTMRRMLDT YIHATPSETV IDFEDLGLIE LIVNQGSEAL IKAIPEDIAS
NPENVAETIE NNVRKTIVDE NPVNPKYYEH MSALLDELIE LRRKKAIAYA EYLQKIRQLA
SKVINPTGSA GGHAYPKTIN TPAKRALYDN LDQNEDLADK VDAAIRLNKQ ADWQGHLIKE
RKIERAVHQT VSQYQVDVDI EALINLIKAQ QEYQ
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